| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917626
Identifier: 229917626
GI number: 229917626
Start: 1865670
End: 1866797
Strand: Direct
Name: 229917626
Synonym: EAT1b_1901
Alternate gene names: NA
Gene position: 1865670-1866797 (Clockwise)
Preceding gene: 229917624
Following gene: 229917627
Centisome position: 62.19
GC content: 53.37
Gene sequence:
>1128_bases ATGTCCGATCGTTATTTTTATTCGACCGCCGCAAAGTGGTCGTTCGTAGGATTCACCGTCTTGGTGCTCTCGACATGGAT CGCCTCGGCAGGATTTGAGCACGTAGACATGGCGCTGTTCGGCTACTACATCGCCGCCGTCATTTGCATGATTGGGATGG TCGTCCGCTTGACGTTATTTTTTGCACGGCCGGCCACCTCACAAGTATTGAAGCGGAGCCTCAAACAAATGAAGGCAGAA AAGAAACGGGCCGGTAAAGCCGTCGCCACGACAACTGTCAATAACATCGTCTTACAGAAGTTCATCTGGGAACGTGGCTG GTACCGCTGGACCCAACATATGTTGATTGCCTGGGGATGTCTCGGGTCGTTCGCCATCACATTCGGGCTGACGTTCCAAT GGATGCGGTTTGATTTGATTGATATCGAGACGTATCAGATTGTCGTCTTTAACATCCCGACCATCAAGATGGCTGCGCAC GGGTTGTTCGCGGAGCTCGTCTATAACGGGTTGAACATCACCGCGCTCATGTTGCTCGTCGGCGTGCTCATGGCACTCTA TCGCCGGATCAACGACCAGGACGTGAAAGTGACCCAGCGGTTCGAATTTGATATTTTACCGCTCCTCATGTTGCTCATCG TCACTGTCTCGGGGTTGTTGTTGACCGTTTCGTACGTGTTCTTCGGAGGCTTCATCCATCACGAGCTCGCCTTGTTCCAT CAATTGACCGTCATCATCTTTTTATGTTACTTCCCGTTCGGTAAACTGTTCCACTTGCCGGTCCGACCGATGGCGGCCAG CGTCCCGATGAACTACCGGGAAGTCGAAGCGGATGAGACCCGTGTCTGCGCCGGGTGCGGGACACGTTATGCGACGGACA ATCAAGTCGAGGACGTCCAAGCGATTTTGCAAGCACAGACGATCCAGCTCGGGCTCAGTGACGGGACCCAGCTCTCCGAT TACTGCCAACCGTGTCGACGTTCGATGCGTGTGAAGATGCAATTGAACTTGATGAACGGACAGTTACCGACACACCCGGT CGATACGAACACAGGCATGTCGATGCCAGGATTCGGCCGACCGAAGGAGACGAAAGGTGAGGCAAAAGATGAGACACCTG TGCGTTAA
Upstream 100 bases:
>100_bases GTCTCGAATCGCTTATCTGTGAAAAAAGTAACAGTTAAGTCGAGATGTCATCTTTATGATGAAACTATGAAGTCGCTCGG AAAGAGAAGGGGGAACACAT
Downstream 100 bases:
>100_bases GTGCGGCGAACCGATCGGCACGCTTGAAGAGATTGAACAAGTGAAACAATTGCTCGAAGGGTCGGACCAACTCGTGAAAG TCGATGCGGCGCACACGGTC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSDRYFYSTAAKWSFVGFTVLVLSTWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLFFARPATSQVLKRSLKQMKAE KKRAGKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGCLGSFAITFGLTFQWMRFDLIDIETYQIVVFNIPTIKMAAH GLFAELVYNGLNITALMLLVGVLMALYRRINDQDVKVTQRFEFDILPLLMLLIVTVSGLLLTVSYVFFGGFIHHELALFH QLTVIIFLCYFPFGKLFHLPVRPMAASVPMNYREVEADETRVCAGCGTRYATDNQVEDVQAILQAQTIQLGLSDGTQLSD YCQPCRRSMRVKMQLNLMNGQLPTHPVDTNTGMSMPGFGRPKETKGEAKDETPVR
Sequences:
>Translated_375_residues MSDRYFYSTAAKWSFVGFTVLVLSTWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLFFARPATSQVLKRSLKQMKAE KKRAGKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGCLGSFAITFGLTFQWMRFDLIDIETYQIVVFNIPTIKMAAH GLFAELVYNGLNITALMLLVGVLMALYRRINDQDVKVTQRFEFDILPLLMLLIVTVSGLLLTVSYVFFGGFIHHELALFH QLTVIIFLCYFPFGKLFHLPVRPMAASVPMNYREVEADETRVCAGCGTRYATDNQVEDVQAILQAQTIQLGLSDGTQLSD YCQPCRRSMRVKMQLNLMNGQLPTHPVDTNTGMSMPGFGRPKETKGEAKDETPVR >Mature_374_residues SDRYFYSTAAKWSFVGFTVLVLSTWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLFFARPATSQVLKRSLKQMKAEK KRAGKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGCLGSFAITFGLTFQWMRFDLIDIETYQIVVFNIPTIKMAAHG LFAELVYNGLNITALMLLVGVLMALYRRINDQDVKVTQRFEFDILPLLMLLIVTVSGLLLTVSYVFFGGFIHHELALFHQ LTVIIFLCYFPFGKLFHLPVRPMAASVPMNYREVEADETRVCAGCGTRYATDNQVEDVQAILQAQTIQLGLSDGTQLSDY CQPCRRSMRVKMQLNLMNGQLPTHPVDTNTGMSMPGFGRPKETKGEAKDETPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42519; Mature: 42387
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRYFYSTAAKWSFVGFTVLVLSTWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLF CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARPATSQVLKRSLKQMKAEKKRAGKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGC HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSFAITFGLTFQWMRFDLIDIETYQIVVFNIPTIKMAAHGLFAELVYNGLNITALMLLV HHHHHHHHHHHHEEHEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH GVLMALYRRINDQDVKVTQRFEFDILPLLMLLIVTVSGLLLTVSYVFFGGFIHHELALFH HHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTVIIFLCYFPFGKLFHLPVRPMAASVPMNYREVEADETRVCAGCGTRYATDNQVEDVQ HHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHH AILQAQTIQLGLSDGTQLSDYCQPCRRSMRVKMQLNLMNGQLPTHPVDTNTGMSMPGFGR HHHHHHHHEEECCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC PKETKGEAKDETPVR CCCCCCCCCCCCCCC >Mature Secondary Structure SDRYFYSTAAKWSFVGFTVLVLSTWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLF CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARPATSQVLKRSLKQMKAEKKRAGKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGC HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSFAITFGLTFQWMRFDLIDIETYQIVVFNIPTIKMAAHGLFAELVYNGLNITALMLLV HHHHHHHHHHHHEEHEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH GVLMALYRRINDQDVKVTQRFEFDILPLLMLLIVTVSGLLLTVSYVFFGGFIHHELALFH HHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTVIIFLCYFPFGKLFHLPVRPMAASVPMNYREVEADETRVCAGCGTRYATDNQVEDVQ HHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHH AILQAQTIQLGLSDGTQLSDYCQPCRRSMRVKMQLNLMNGQLPTHPVDTNTGMSMPGFGR HHHHHHHHEEECCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC PKETKGEAKDETPVR CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA