| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvgM [H]
Identifier: 229917624
GI number: 229917624
Start: 1864526
End: 1865167
Strand: Direct
Name: yvgM [H]
Synonym: EAT1b_1899
Alternate gene names: 229917624
Gene position: 1864526-1865167 (Clockwise)
Preceding gene: 229917623
Following gene: 229917626
Centisome position: 62.15
GC content: 53.74
Gene sequence:
>642_bases ATGACGCAACATCCACTTCAACTCACATTCGAAGTCGGGATGATGGCGACGGTGAGCGCCTTCGTCCTCGCCTTCGGAGC GGCTTATTTCATGCATCGCCGTCAATTCAAAGGAAAGCGGCTGCTCGAGACAGTGTTTTTACTGCCGCTCATCTTGCCGC CGACAGTCATCGGACTATACGCTTTGATTGTCCTCGGGAACAACGGGATCGGCGGATTGTTACCGATTACGATCTTGTTC ACAAAACAGGCGAACATCATCGCATCCGCCTTGGCCGCGTTTCCGCTCATCTACCAAACGATTCGTCTCGGTCTTAAACA ACTCGATGCGGAATGGTATGAGGCCGGACGCGTGCTCGGTGGGTCAGAGCGCCAACTGTTCACCTACGTGACGATTCCGC TGCTGTTACCTGCGTTGACGAGTGGGTTTGTCCTTGGTTTCGCACGGTCAATCGGCGAGTTCGGAATCACGATGATGATT GCCGGAAATATCCCGGGCGAGACGATGACGCTCGCCACAGCGATTTATGTGGCGACAATCAACGGTGATATGACCCAGGC GCTCGTCTGGAGCGGGTGGTTAGTTGGTTTGGCGTTTTTAGTCCTCTGGCTAAGTGAACGTTACGGCAAGCGTTCATATT AG
Upstream 100 bases:
>100_bases CGGCGGTCCGGTTGACGCACAACCCATACGTACACGATGTGTACGCGCGTTTGTTTGACGATGATATCCAAGCTCACTTT TTAGCGAAAGGATTTTCTAA
Downstream 100 bases:
>100_bases TCGATCACGTCGATTTTTTTCACATAAGACCGGTTCGGAGTATTTAAGATACTCGGACCGGTCTTTTTCCAAATGTGGAC GTGGTCCCCGACAGTGATTT
Product: molybdate ABC transporter inner membrane subunit
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTQHPLQLTFEVGMMATVSAFVLAFGAAYFMHRRQFKGKRLLETVFLLPLILPPTVIGLYALIVLGNNGIGGLLPITILF TKQANIIASALAAFPLIYQTIRLGLKQLDAEWYEAGRVLGGSERQLFTYVTIPLLLPALTSGFVLGFARSIGEFGITMMI AGNIPGETMTLATAIYVATINGDMTQALVWSGWLVGLAFLVLWLSERYGKRSY
Sequences:
>Translated_213_residues MTQHPLQLTFEVGMMATVSAFVLAFGAAYFMHRRQFKGKRLLETVFLLPLILPPTVIGLYALIVLGNNGIGGLLPITILF TKQANIIASALAAFPLIYQTIRLGLKQLDAEWYEAGRVLGGSERQLFTYVTIPLLLPALTSGFVLGFARSIGEFGITMMI AGNIPGETMTLATAIYVATINGDMTQALVWSGWLVGLAFLVLWLSERYGKRSY >Mature_212_residues TQHPLQLTFEVGMMATVSAFVLAFGAAYFMHRRQFKGKRLLETVFLLPLILPPTVIGLYALIVLGNNGIGGLLPITILFT KQANIIASALAAFPLIYQTIRLGLKQLDAEWYEAGRVLGGSERQLFTYVTIPLLLPALTSGFVLGFARSIGEFGITMMIA GNIPGETMTLATAIYVATINGDMTQALVWSGWLVGLAFLVLWLSERYGKRSY
Specific function: could be part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=176, Percent_Identity=40.3409090909091, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788764, Length=154, Percent_Identity=35.0649350649351, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082099, Length=176, Percent_Identity=31.8181818181818, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23308; Mature: 23177
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHPLQLTFEVGMMATVSAFVLAFGAAYFMHRRQFKGKRLLETVFLLPLILPPTVIGLY CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHH ALIVLGNNGIGGLLPITILFTKQANIIASALAAFPLIYQTIRLGLKQLDAEWYEAGRVLG HHHHCCCCCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GSERQLFTYVTIPLLLPALTSGFVLGFARSIGEFGITMMIAGNIPGETMTLATAIYVATI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHEEEEEE NGDMTQALVWSGWLVGLAFLVLWLSERYGKRSY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TQHPLQLTFEVGMMATVSAFVLAFGAAYFMHRRQFKGKRLLETVFLLPLILPPTVIGLY CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHH ALIVLGNNGIGGLLPITILFTKQANIIASALAAFPLIYQTIRLGLKQLDAEWYEAGRVLG HHHHCCCCCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GSERQLFTYVTIPLLLPALTSGFVLGFARSIGEFGITMMIAGNIPGETMTLATAIYVATI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHEEEEEE NGDMTQALVWSGWLVGLAFLVLWLSERYGKRSY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]