| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mnmG [H]
Identifier: 229917462
GI number: 229917462
Start: 1705837
End: 1707723
Strand: Direct
Name: mnmG [H]
Synonym: EAT1b_1737
Alternate gene names: 229917462
Gene position: 1705837-1707723 (Clockwise)
Preceding gene: 229917461
Following gene: 229917463
Centisome position: 56.86
GC content: 50.4
Gene sequence:
>1887_bases ATGGCTTATACGGCAGGCGAATTTGACGTCATCGTCATCGGGGCCGGACACGCAGGGATTGAAGCAGCACTTGCATCGGC TCGCATGGGCGCGAAAACAGCGATGCTCACCATGAACCCCGATATGGTCGGGTTCATGTATTGCAACCCATCAATCGGTG GGCCGGCGAAAGGAATCGTCGTACGTGAAATCGATGCGCTCGGTGGCGAGATGGGGCGCGCGATTGACGCGACTTACATC CAAATGAAGATGCTCAACACATCGAAAGGTCCGGCGGTACGTGCATTACGTGCACAGGCGGACAAATTCCAATACCAAAA TCACATGAAGAAAGTGCTAGAAGACGAACCGAATCTACTGCTTCGTCAGGCGCTAGTCGAACGCTTGTTGATTGAGGATG GAGAAGTACGTGGCGTGGTAACGAACACAGGTTCAGAATATCGCGCGAAAGCGGTCATCGTTACAACGGGAACGTTCATG CGCGGTCAAATCATCATCGGTGAATTGGCATATGAAAGTGGCCCGAACAACCAAATGCCTTCGGTCGAGTTATCGAAGCA TCTAGAAGAGCTCGGTCTCGACTTAGTTCGATTCAAAACGGGAACACCGCCACGAATCGACGGCAAGACAATCGATTACT CGAAGACGGAGATTCAACCAGGAGACGAGAATCCATCATTCTTCTCGTACACCTCGACGGATTTGAATCCGATCGAACAA ATCCCATGCTGGCTCACGTACACGAGTGAGCGCACGCACCAATTGATTGATGAGAACTTGCATCGCTCACCGATGTACTC GGGTGCGATTAAAGGAACGGGACCACGTTATTGCCCATCGATTGAAGATAAGGTCGTTCGCTTTAATGATAAACCGCGTC ACCAAATCTTCTTGGAGCCAGAAGGTCGCGATACAGAAGAAATCTATGTTCAAGGCTTCTCAACGAGTATGCCAGAAGAC GTGCAACATCAGATGCTTCGCACAATCCCAGGTCTTGAAAATTCAGAGATGATGCGTCCCGGTTATGCCATCGAGTACGA TGCAGTCGTACCGACACAGCTTTGGCCAACGCTCGAAACAAAAGCAGTCCCTGGCCTTTTCACAGCGGGACAAATCAACG GGACGAGCGGGTACGAAGAAGCGGCTGGACAGGGCATCATGGCGGGAATCAACGCCGCATGCAAAGTGCTCGGAAAAGAT CCGGTCATCTTGGACCGTTCGCAAGCGTACATCGGCGTCTTAATCGATGACCTCGTGACGAAAGGGACGAACGAACCGTA TCGCCTTCTCACATCACGTGCCGAATACCGTCTTTTGTTGCGTCATGACAATGCGGACTTGCGACTCAGCGACATCGGGT ATGAGATCGGCTTACTTTCAGAAGATCGTCACACTCACCTCAACGAGAAGCGTGTAGCGATTGAAAAAGAAGTGAAGCGA CTTGCGTCACTTGTCGTCAAACCGACACCTGAAGTCAATGCGATGCTCGAATCGGTCGGTGCGCACCCGCTTAAAGAAGC GACGCATGCCAACATCTTGTTGAAACGTCCGGAAGTATCTTATGAAGCACTCATGACGGTCGTTCCGTCAACGGAAGAAT TGTCGTATGAAGTGAAAGAGCAAGTCGAGATTCAAGTGAAGTATGAAGGTTATATTTCCAAACAGCTTGAACAAGTCGAG AAGATGCGTCGCATGGAAGAAAAACGAATCCCGGAAAACTTGGATTACGATGCGATCGGTGGTCTCGCGACAGAAGCGAA ACAAAAACTAAAACAAGTTCGTCCTCTTTCGATCGGTCAAGCGTCTCGTATCTCAGGCGTAAACCCAGCAGACGTGTCAA TCTTGCTCGTCTATATCGAACAAGGACAATACGCAACGGTGGAGTGA
Upstream 100 bases:
>100_bases GGATACGCTCGGTGAAATCAATGGAGATACCGTACAGGAGAGCTTGATTGATCAGCTCTTTTCACAGTTTTGTCTTGGGA AATAATAAGGAGGAACGAAT
Downstream 100 bases:
>100_bases AACGATGAACGAATCTCAATTTATTGAAGCGTTACGAGCTGAAGGGTTTGAACTGAGTGAGACACAACTCAGTCAGTTCA AACGTTACTTCGAAATGCTC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MAYTAGEFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDALGGEMGRAIDATYI QMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLLLRQALVERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFM RGQIIIGELAYESGPNNQMPSVELSKHLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQ IPCWLTYTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRDTEEIYVQGFSTSMPED VQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLETKAVPGLFTAGQINGTSGYEEAAGQGIMAGINAACKVLGKD PVILDRSQAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKR LASLVVKPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKEQVEIQVKYEGYISKQLEQVE KMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQASRISGVNPADVSILLVYIEQGQYATVE
Sequences:
>Translated_628_residues MAYTAGEFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDALGGEMGRAIDATYI QMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLLLRQALVERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFM RGQIIIGELAYESGPNNQMPSVELSKHLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQ IPCWLTYTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRDTEEIYVQGFSTSMPED VQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLETKAVPGLFTAGQINGTSGYEEAAGQGIMAGINAACKVLGKD PVILDRSQAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKR LASLVVKPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKEQVEIQVKYEGYISKQLEQVE KMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQASRISGVNPADVSILLVYIEQGQYATVE >Mature_627_residues AYTAGEFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIVVREIDALGGEMGRAIDATYIQ MKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLLLRQALVERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFMR GQIIIGELAYESGPNNQMPSVELSKHLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQI PCWLTYTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPEGRDTEEIYVQGFSTSMPEDV QHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLETKAVPGLFTAGQINGTSGYEEAAGQGIMAGINAACKVLGKDP VILDRSQAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKRL ASLVVKPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKEQVEIQVKYEGYISKQLEQVEK MRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQASRISGVNPADVSILLVYIEQGQYATVE
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=641, Percent_Identity=42.9017160686427, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI19882217, Length=667, Percent_Identity=41.2293853073463, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI183227703, Length=682, Percent_Identity=40.3225806451613, Blast_Score=442, Evalue=1e-124, Organism=Escherichia coli, GI2367273, Length=615, Percent_Identity=53.9837398373984, Blast_Score=652, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=626, Percent_Identity=38.9776357827476, Blast_Score=435, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6321202, Length=618, Percent_Identity=43.5275080906149, Blast_Score=480, Evalue=1e-136, Organism=Drosophila melanogaster, GI24658174, Length=643, Percent_Identity=42.3017107309487, Blast_Score=469, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 69650; Mature: 69518
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTAGEFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIV CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCEE VREIDALGGEMGRAIDATYIQMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLL EEEHHHHCCHHCCHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LRQALVERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFMRGQIIIGELAYESGPNNQMP HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEECCEEECEEEEEEEECCCCCCCCCC SVELSKHLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQ CHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHH IPCWLTYTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEP CCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECC EGRDTEEIYVQGFSTSMPEDVQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLET CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCC KAVPGLFTAGQINGTSGYEEAAGQGIMAGINAACKVLGKDPVILDRSQAYIGVLIDDLVT CCCCCEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHH KGTNEPYRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKR CCCCCCHHHHHCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHH LASLVVKPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKE HHHHHCCCCCHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHEEECCCHHHHHHEECC QVEIQVKYEGYISKQLEQVEKMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQ CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCC ASRISGVNPADVSILLVYIEQGQYATVE CHHCCCCCCCCEEEEEEEEECCCEEECC >Mature Secondary Structure AYTAGEFDVIVIGAGHAGIEAALASARMGAKTAMLTMNPDMVGFMYCNPSIGGPAKGIV CCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCEE VREIDALGGEMGRAIDATYIQMKMLNTSKGPAVRALRAQADKFQYQNHMKKVLEDEPNLL EEEHHHHCCHHCCHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LRQALVERLLIEDGEVRGVVTNTGSEYRAKAVIVTTGTFMRGQIIIGELAYESGPNNQMP HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEECCEEECEEEEEEEECCCCCCCCCC SVELSKHLEELGLDLVRFKTGTPPRIDGKTIDYSKTEIQPGDENPSFFSYTSTDLNPIEQ CHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHH IPCWLTYTSERTHQLIDENLHRSPMYSGAIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEP CCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECC EGRDTEEIYVQGFSTSMPEDVQHQMLRTIPGLENSEMMRPGYAIEYDAVVPTQLWPTLET CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCC KAVPGLFTAGQINGTSGYEEAAGQGIMAGINAACKVLGKDPVILDRSQAYIGVLIDDLVT CCCCCEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHH KGTNEPYRLLTSRAEYRLLLRHDNADLRLSDIGYEIGLLSEDRHTHLNEKRVAIEKEVKR CCCCCCHHHHHCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHH LASLVVKPTPEVNAMLESVGAHPLKEATHANILLKRPEVSYEALMTVVPSTEELSYEVKE HHHHHCCCCCHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHEEECCCHHHHHHEECC QVEIQVKYEGYISKQLEQVEKMRRMEEKRIPENLDYDAIGGLATEAKQKLKQVRPLSIGQ CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCC ASRISGVNPADVSILLVYIEQGQYATVE CHHCCCCCCCCEEEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA