| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is dgk [H]
Identifier: 229917438
GI number: 229917438
Start: 1671790
End: 1672425
Strand: Direct
Name: dgk [H]
Synonym: EAT1b_1713
Alternate gene names: 229917438
Gene position: 1671790-1672425 (Clockwise)
Preceding gene: 229917423
Following gene: 229917439
Centisome position: 55.73
GC content: 41.82
Gene sequence:
>636_bases ATGTTTATAACGGTAGAAGGACCGATTGGTGTCGGGAAAACATCACTGGCCCATATCATCAGTCAGCATTTCTCGATGCA GATGCTGAATGAAATTGTAGAAGAGAACCCATTTCTCGGCAAGTTTTATGAAGATATCGAAGAATGGAGTTTCCAAACGG AAATGTTCTTCTTGTGCAATCGATTCAAGCAGTTGGATGATATTCACAAACACCACTTGAGTCAGCAACAATCCGTCGTT TCGGACTATCATATTTTCAAAAACTTGATTTTTGCTCACCGTTCGCTGAAACCGGCACACTTGAACAAGTACGAGCAGAT TTATAAGATTTTGACACATGATATGCCGAAACCTGATGTCGTCATTTACTTACATGCCAGCATTGAGACATTAATGAAAC GAGTCGCCTTGCGTGGACGTGAAGTGGAAGAGAATATGTCTCGTGATTACCTCGAACAACTTGCTCACGACTATGAGACG TTTGTTGAATCATATCGCGCGGCCCATCCAGAAGTGAAAATCCTCTCGTTCAGTGGGGATGAACTCGACTTTGTACACAA TCCGGACGACTTGACTCATGTCCTAAAAACGATTGAGCGTGAATTAGAATTAACTAAAGGAGCCCAAATAAAATGA
Upstream 100 bases:
>100_bases TAAAACTATGAAAAAAAATGAAAATCAAATCCCTCGCCATATCGCTCGTATTGTGTGCTAGAATGGAACTTGCACTTTGG ATAATGGAGGATGACATCAT
Downstream 100 bases:
>100_bases AGCTGATTGATAAATATAACATCCCGAACGATACGATCATTACAATCGGTGGAATGGTTGGGATCGGGAAATCAACGATC ACCAATTCGTTAGCCGATGC
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDIEEWSFQTEMFFLCNRFKQLDDIHKHHLSQQQSVV SDYHIFKNLIFAHRSLKPAHLNKYEQIYKILTHDMPKPDVVIYLHASIETLMKRVALRGREVEENMSRDYLEQLAHDYET FVESYRAAHPEVKILSFSGDELDFVHNPDDLTHVLKTIERELELTKGAQIK
Sequences:
>Translated_211_residues MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDIEEWSFQTEMFFLCNRFKQLDDIHKHHLSQQQSVV SDYHIFKNLIFAHRSLKPAHLNKYEQIYKILTHDMPKPDVVIYLHASIETLMKRVALRGREVEENMSRDYLEQLAHDYET FVESYRAAHPEVKILSFSGDELDFVHNPDDLTHVLKTIERELELTKGAQIK >Mature_211_residues MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDIEEWSFQTEMFFLCNRFKQLDDIHKHHLSQQQSVV SDYHIFKNLIFAHRSLKPAHLNKYEQIYKILTHDMPKPDVVIYLHASIETLMKRVALRGREVEENMSRDYLEQLAHDYET FVESYRAAHPEVKILSFSGDELDFVHNPDDLTHVLKTIERELELTKGAQIK
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24818; Mature: 24818
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDIEEWSFQTEMFFLCN CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RFKQLDDIHKHHLSQQQSVVSDYHIFKNLIFAHRSLKPAHLNKYEQIYKILTHDMPKPDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCE VIYLHASIETLMKRVALRGREVEENMSRDYLEQLAHDYETFVESYRAAHPEVKILSFSGD EEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ELDFVHNPDDLTHVLKTIERELELTKGAQIK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDIEEWSFQTEMFFLCN CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RFKQLDDIHKHHLSQQQSVVSDYHIFKNLIFAHRSLKPAHLNKYEQIYKILTHDMPKPDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCE VIYLHASIETLMKRVALRGREVEENMSRDYLEQLAHDYETFVESYRAAHPEVKILSFSGD EEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ELDFVHNPDDLTHVLKTIERELELTKGAQIK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]