Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yozG [H]

Identifier: 229917312

GI number: 229917312

Start: 1539231

End: 1539449

Strand: Reverse

Name: yozG [H]

Synonym: EAT1b_1587

Alternate gene names: 229917312

Gene position: 1539449-1539231 (Counterclockwise)

Preceding gene: 229917313

Following gene: 229917311

Centisome position: 51.32

GC content: 48.4

Gene sequence:

>219_bases
ATGGCGATGATTGTGAATCTGGATGTGATGTTGGCGAAACGAAAAATGAGTGTGACGGAACTGTCGGAGCGAGTCGGGAT
TACGATGGCGAACTTGTCGATTTTAAAAAACGGGAAGGCCAAAGCGATTCGTTTTTCGACACTTGAAGCGATTTGCGAAG
CACTCGACTGTCAACCGGGAGACATATTGGAATATCGAGCGGACGAGCGAGCAGAGTGA

Upstream 100 bases:

>100_bases
GCATTCGTCATTGCGGTTTTTGCTGAGTTGTTACAGAAACTATTGAAGCGCGCCATCGACATGAAACAAGAAATCGATTT
GACGGTCTGAGGTGAGAGAA

Downstream 100 bases:

>100_bases
ATCTCTGCTTTTTATATGAATTTGAAACGTGTTTGATTCAAGTTACGTATAAAAGATAAATCGTTTAAGGGGAGATTAGA
AAAAATGGTTCAAACATGGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAMIVNLDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRFSTLEAICEALDCQPGDILEYRADERAE

Sequences:

>Translated_72_residues
MAMIVNLDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRFSTLEAICEALDCQPGDILEYRADERAE
>Mature_71_residues
AMIVNLDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRFSTLEAICEALDCQPGDILEYRADERAE

Specific function: Unknown

COG id: COG3655

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7988; Mature: 7856

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIVNLDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRFSTLEAICEALDCQPG
CEEEEEHHHHHHHHCCCHHHHHHHHCEEEEHHEEECCCCCCEEEHHHHHHHHHHHCCCCC
DILEYRADERAE
CEEEECCCCCCC
>Mature Secondary Structure 
AMIVNLDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRFSTLEAICEALDCQPG
EEEEEHHHHHHHHCCCHHHHHHHHCEEEEHHEEECCCCCCEEEHHHHHHHHHHHCCCCC
DILEYRADERAE
CEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]