| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917311
Identifier: 229917311
GI number: 229917311
Start: 1538460
End: 1539146
Strand: Reverse
Name: 229917311
Synonym: EAT1b_1586
Alternate gene names: NA
Gene position: 1539146-1538460 (Counterclockwise)
Preceding gene: 229917312
Following gene: 229917310
Centisome position: 51.31
GC content: 44.25
Gene sequence:
>687_bases ATGGTTCAAACATGGACAGAACGAACACATGAAGCAATCAATGGGAAACGAGGTCTACTGTTAGTCTGGTCGTTTCTCTG TGCCGTGATATTAGAGTTTATTGCAATATTTGACCCAACGCTTTACGGGGCGAAAGCCGATTCAGTACAGGCGATTGTAT TCCTTTTTAGTACGATGGTAGTATCCTTCATGTTGTATCCAATCATTATCGGTTATCACTGGGTCATCCTTTCCATCATT CGCGGACAAGACGCGCAGTTTCGTGATGTATTTCGACCGATGAAAGAAAGATTTGGTAAGAATGTGACTGCTGTCATCTT ACTAGCCATCTTTCAGACGCTATGGACACTTTTGTTCATTGTCCCGGGAATCGTGAAGTTCTTCTCCTACGCGTTTACGT ACTTTATTTTGCGAGATGAACCATCATTATCGGTTAGAGAATCCATCACAAAATCACGCGCGTTGATGCATGGGCGGAAA TGGGAGGCGTTCAAACTGATTTTGCCGTTCGTCCCGATTTATTTGATTGGCTTCACATTGTTTATGGTCGTGAATTCTGT CTTACTTGCCGCATTATCACTATCTATAGCGACAATCCTCATTCGTCCATTCGTCGTTGCGCGCTTCGCTGTCATGTATG AAGATACGCGTCGGGCTTACGACGAACAATGGAACAAGCCAGCCTGA
Upstream 100 bases:
>100_bases CGAGCGAGCAGAGTGAATCTCTGCTTTTTATATGAATTTGAAACGTGTTTGATTCAAGTTACGTATAAAAGATAAATCGT TTAAGGGGAGATTAGAAAAA
Downstream 100 bases:
>100_bases AGCATATCGAACAGAGGGGAAATTGAATGAACGTGCTACAATCTTCATGAAGAGAAAGGGGAATGCGGAATGAAGATTGG GATCATCGGGGCCGGTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MVQTWTERTHEAINGKRGLLLVWSFLCAVILEFIAIFDPTLYGAKADSVQAIVFLFSTMVVSFMLYPIIIGYHWVILSII RGQDAQFRDVFRPMKERFGKNVTAVILLAIFQTLWTLLFIVPGIVKFFSYAFTYFILRDEPSLSVRESITKSRALMHGRK WEAFKLILPFVPIYLIGFTLFMVVNSVLLAALSLSIATILIRPFVVARFAVMYEDTRRAYDEQWNKPA
Sequences:
>Translated_228_residues MVQTWTERTHEAINGKRGLLLVWSFLCAVILEFIAIFDPTLYGAKADSVQAIVFLFSTMVVSFMLYPIIIGYHWVILSII RGQDAQFRDVFRPMKERFGKNVTAVILLAIFQTLWTLLFIVPGIVKFFSYAFTYFILRDEPSLSVRESITKSRALMHGRK WEAFKLILPFVPIYLIGFTLFMVVNSVLLAALSLSIATILIRPFVVARFAVMYEDTRRAYDEQWNKPA >Mature_228_residues MVQTWTERTHEAINGKRGLLLVWSFLCAVILEFIAIFDPTLYGAKADSVQAIVFLFSTMVVSFMLYPIIIGYHWVILSII RGQDAQFRDVFRPMKERFGKNVTAVILLAIFQTLWTLLFIVPGIVKFFSYAFTYFILRDEPSLSVRESITKSRALMHGRK WEAFKLILPFVPIYLIGFTLFMVVNSVLLAALSLSIATILIRPFVVARFAVMYEDTRRAYDEQWNKPA
Specific function: Unknown
COG id: COG5523
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26309; Mature: 26309
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQTWTERTHEAINGKRGLLLVWSFLCAVILEFIAIFDPTLYGAKADSVQAIVFLFSTMV CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH VSFMLYPIIIGYHWVILSIIRGQDAQFRDVFRPMKERFGKNVTAVILLAIFQTLWTLLFI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VPGIVKFFSYAFTYFILRDEPSLSVRESITKSRALMHGRKWEAFKLILPFVPIYLIGFTL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FMVVNSVLLAALSLSIATILIRPFVVARFAVMYEDTRRAYDEQWNKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVQTWTERTHEAINGKRGLLLVWSFLCAVILEFIAIFDPTLYGAKADSVQAIVFLFSTMV CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH VSFMLYPIIIGYHWVILSIIRGQDAQFRDVFRPMKERFGKNVTAVILLAIFQTLWTLLFI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VPGIVKFFSYAFTYFILRDEPSLSVRESITKSRALMHGRKWEAFKLILPFVPIYLIGFTL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FMVVNSVLLAALSLSIATILIRPFVVARFAVMYEDTRRAYDEQWNKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA