| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yoaS [H]
Identifier: 229917313
GI number: 229917313
Start: 1539460
End: 1539939
Strand: Reverse
Name: yoaS [H]
Synonym: EAT1b_1588
Alternate gene names: 229917313
Gene position: 1539939-1539460 (Counterclockwise)
Preceding gene: 229917314
Following gene: 229917312
Centisome position: 51.33
GC content: 46.67
Gene sequence:
>480_bases GTGAAACGAGAAACCGTCTTTTTAAAACTATCGGTGATTGTCTTAGCCCTCCCGATTCTTGCGGCCTGTATCTTTTTACT ACCGTTTCTTTGGCGAGACGCAAAAGAGAGCGGGGGATGGATTGCGAATTCGATGCGTCCGATTGTTATCGGGATGTATG TGGCGGCAGTTCCCTATTTTATGGCTTTGTTCCAGACGTTTACCTTACTTGGATTGATTGACCGGAACGAGGCATTCTCC TATGAAGCGGTGAAAGTACTTCGGGTAATCAAGTATTGTGCATTGACCATCACGGTTATCTATACGGCGTTGCTTCCCTT CTTCTATTGGTTCGCTGAGCGTGACGACTCGCCAGGATTTTTAGTCATCGGGTTCGTCTTCGTCTTCGCCGCATTCGTCA TTGCGGTTTTTGCTGAGTTGTTACAGAAACTATTGAAGCGCGCCATCGACATGAAACAAGAAATCGATTTGACGGTCTGA
Upstream 100 bases:
>100_bases GAGTACATCTTGAGGTCTATTTTTTTCGATAAATTTTTATTGATAAACGATAAAAATGGGCGTATGATAAAAGAAATAAA ATGAGTGAGGTGTATGACAG
Downstream 100 bases:
>100_bases GGTGAGAGAAATGGCGATGATTGTGAATCTGGATGTGATGTTGGCGAAACGAAAAATGAGTGTGACGGAACTGTCGGAGC GAGTCGGGATTACGATGGCG
Product: YoaS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV
Sequences:
>Translated_159_residues MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV >Mature_159_residues MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021396 [H]
Pfam domain/function: PF11234 DUF3036 [H]
EC number: NA
Molecular weight: Translated: 18106; Mature: 18106
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH MALFQTFTLLGLIDRNEAFSYEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC >Mature Secondary Structure MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH MALFQTFTLLGLIDRNEAFSYEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]