Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yoaS [H]

Identifier: 229917313

GI number: 229917313

Start: 1539460

End: 1539939

Strand: Reverse

Name: yoaS [H]

Synonym: EAT1b_1588

Alternate gene names: 229917313

Gene position: 1539939-1539460 (Counterclockwise)

Preceding gene: 229917314

Following gene: 229917312

Centisome position: 51.33

GC content: 46.67

Gene sequence:

>480_bases
GTGAAACGAGAAACCGTCTTTTTAAAACTATCGGTGATTGTCTTAGCCCTCCCGATTCTTGCGGCCTGTATCTTTTTACT
ACCGTTTCTTTGGCGAGACGCAAAAGAGAGCGGGGGATGGATTGCGAATTCGATGCGTCCGATTGTTATCGGGATGTATG
TGGCGGCAGTTCCCTATTTTATGGCTTTGTTCCAGACGTTTACCTTACTTGGATTGATTGACCGGAACGAGGCATTCTCC
TATGAAGCGGTGAAAGTACTTCGGGTAATCAAGTATTGTGCATTGACCATCACGGTTATCTATACGGCGTTGCTTCCCTT
CTTCTATTGGTTCGCTGAGCGTGACGACTCGCCAGGATTTTTAGTCATCGGGTTCGTCTTCGTCTTCGCCGCATTCGTCA
TTGCGGTTTTTGCTGAGTTGTTACAGAAACTATTGAAGCGCGCCATCGACATGAAACAAGAAATCGATTTGACGGTCTGA

Upstream 100 bases:

>100_bases
GAGTACATCTTGAGGTCTATTTTTTTCGATAAATTTTTATTGATAAACGATAAAAATGGGCGTATGATAAAAGAAATAAA
ATGAGTGAGGTGTATGACAG

Downstream 100 bases:

>100_bases
GGTGAGAGAAATGGCGATGATTGTGAATCTGGATGTGATGTTGGCGAAACGAAAAATGAGTGTGACGGAACTGTCGGAGC
GAGTCGGGATTACGATGGCG

Product: YoaS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS
YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV

Sequences:

>Translated_159_residues
MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS
YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV
>Mature_159_residues
MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYFMALFQTFTLLGLIDRNEAFS
YEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGFLVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021396 [H]

Pfam domain/function: PF11234 DUF3036 [H]

EC number: NA

Molecular weight: Translated: 18106; Mature: 18106

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH
MALFQTFTLLGLIDRNEAFSYEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure
MKRETVFLKLSVIVLALPILAACIFLLPFLWRDAKESGGWIANSMRPIVIGMYVAAVPYF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH
MALFQTFTLLGLIDRNEAFSYEAVKVLRVIKYCALTITVIYTALLPFFYWFAERDDSPGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVIGFVFVFAAFVIAVFAELLQKLLKRAIDMKQEIDLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]