| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mtnD [H]
Identifier: 229917165
GI number: 229917165
Start: 1407055
End: 1407588
Strand: Direct
Name: mtnD [H]
Synonym: EAT1b_1439
Alternate gene names: 229917165
Gene position: 1407055-1407588 (Clockwise)
Preceding gene: 229917164
Following gene: 229917167
Centisome position: 46.9
GC content: 47.19
Gene sequence:
>534_bases ATGGCAACGATTTATTTTCAACAAACCGAAGAACGTGTCAGCGACCAACAAGAGGTACGTGACTTTTTAGAATCACGAGA CATTCTTTACGAAGCGTGGGACATCACGAAATTACCGGTTTCCCTTCAAGAAAATTATCAACTGACAGACGAGGACAAAG AAGCCATCTTGGCGACGTTCCGTGACGAGATTCAAGATGTGTCGGCACGACGCGGCTACAAGACGGCTGACGTCATCTCA CTATCCGACGCGACACCGAATTTAGATGAACTGCTCGTCAACTTTCAAAAAGAGCATCACCATACGGATGACGAAGTTCG CTTCATCGTCAGTGGTCACGGCATTTTTGCCATCGACGATGCAGAACGCGGATACTTCAATATCGAACTCAATCCAGGTG ATCTCATCTCCGTGCCGGTCAACACACGTCATTACTTCACGTTACAAGAAGACCGCCAAGTCGTCGCCGTTCGTATTTTC GTGACGACTGAAGGCTGGGTACCGATTTACGACAAAGAGAATGTAACTGCATAA
Upstream 100 bases:
>100_bases CCCGCTGCGGCAAAACGTTACTTAGAGGCATATGAATTTTTGTTTAGCTATTCATTAAAATTACGCGCCTTAGGCGTCCA TTCATAAGGAGGAATTCAAC
Downstream 100 bases:
>100_bases GAAAAGGTCTCTCGCTTAAAAACGAGAGACCACTTTTTATTGTTTGACCGCTGTCGGTTTCGATGAGAACCAGCCCCATG TCGCAATCCCGACCATGACT
Product: Acireductone dioxygenase ARD
Products: NA
Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MATIYFQQTEERVSDQQEVRDFLESRDILYEAWDITKLPVSLQENYQLTDEDKEAILATFRDEIQDVSARRGYKTADVIS LSDATPNLDELLVNFQKEHHHTDDEVRFIVSGHGIFAIDDAERGYFNIELNPGDLISVPVNTRHYFTLQEDRQVVAVRIF VTTEGWVPIYDKENVTA
Sequences:
>Translated_177_residues MATIYFQQTEERVSDQQEVRDFLESRDILYEAWDITKLPVSLQENYQLTDEDKEAILATFRDEIQDVSARRGYKTADVIS LSDATPNLDELLVNFQKEHHHTDDEVRFIVSGHGIFAIDDAERGYFNIELNPGDLISVPVNTRHYFTLQEDRQVVAVRIF VTTEGWVPIYDKENVTA >Mature_176_residues ATIYFQQTEERVSDQQEVRDFLESRDILYEAWDITKLPVSLQENYQLTDEDKEAILATFRDEIQDVSARRGYKTADVISL SDATPNLDELLVNFQKEHHHTDDEVRFIVSGHGIFAIDDAERGYFNIELNPGDLISVPVNTRHYFTLQEDRQVVAVRIFV TTEGWVPIYDKENVTA
Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me
COG id: COG1791
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acireductone dioxygenase (ARD) family [H]
Homologues:
Organism=Homo sapiens, GI171460928, Length=106, Percent_Identity=33.9622641509434, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323651, Length=114, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=6e-12, Organism=Drosophila melanogaster, GI161082987, Length=106, Percent_Identity=35.8490566037736, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004313 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF03079 ARD [H]
EC number: =1.13.11.54; =1.13.11.53 [H]
Molecular weight: Translated: 20529; Mature: 20398
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIYFQQTEERVSDQQEVRDFLESRDILYEAWDITKLPVSLQENYQLTDEDKEAILATF CEEEEEECHHHHCCCHHHHHHHHHCCCCEEEECCCEECCEEECCCCCCCCCHHHHHHHHH RDEIQDVSARRGYKTADVISLSDATPNLDELLVNFQKEHHHTDDEVRFIVSGHGIFAIDD HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEC AERGYFNIELNPGDLISVPVNTRHYFTLQEDRQVVAVRIFVTTEGWVPIYDKENVTA CCCCEEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEECCCEEEECCCCCCC >Mature Secondary Structure ATIYFQQTEERVSDQQEVRDFLESRDILYEAWDITKLPVSLQENYQLTDEDKEAILATF EEEEEECHHHHCCCHHHHHHHHHCCCCEEEECCCEECCEEECCCCCCCCCHHHHHHHHH RDEIQDVSARRGYKTADVISLSDATPNLDELLVNFQKEHHHTDDEVRFIVSGHGIFAIDD HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEC AERGYFNIELNPGDLISVPVNTRHYFTLQEDRQVVAVRIFVTTEGWVPIYDKENVTA CCCCEEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA