| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yugO [H]
Identifier: 229917136
GI number: 229917136
Start: 1382037
End: 1383056
Strand: Reverse
Name: yugO [H]
Synonym: EAT1b_1410
Alternate gene names: 229917136
Gene position: 1383056-1382037 (Counterclockwise)
Preceding gene: 229917142
Following gene: 229917135
Centisome position: 46.1
GC content: 47.16
Gene sequence:
>1020_bases GTGCATATCTTATTTCGTGTGTGGAAAGGGTTAGCGAAATTATCATTTTTGAATGTCGTCTTAGCTTCGATTGGCATCAT TATCTTAGGAACCGTGCTCGGGTATGTGTTAGAACCAGAGACATTCGGATCATTATTTGATTCGTTCTGGTGGACGATGA CGACATTGACGACCGTCGGATATGGGGACTTTTATCCGTCCTCCGTGGCAGGGCGATGGCTCGGGATATTCTTATTCCTA TTCGGGATTGGGATTATCGGGGCGTTGATTGGAAAATTGGTTGAAATCGGTGCGACGTTTCAACGGCTAAAACGGGAGGG AAGACTAGTGTATCGTGGAGAAGGACATTATGTGTATATCGGGTGGTCCCCGAAGACGAAGAAAGCAATCGATGAAGTGC TTAACTACGAACCGAAAGCAGAGATCGTATTGATTGATCAGTTAGTTGAGGAACCGTACGTGCACGATCAAGTTCACTTC GTATCAGGCGATGCTTCGGATGAAGCGGTATTGCTGCAAGCAAACGTCTTGAAGGCGCGACGCGTCGCGATTTTTGCGGA TGCCCGTATCACGGAGACGTTACTCGCCGATGGGAAGTCGTTATTGATTGCGTCAGCGGTCGAGGCACTCTCTTCTGAGT ATCAGGTGGACTTGCACACGGTCGTCGAAGTGTGTGAAGAAAGAAATATCTCGAAATTCAAACACGTCCGCGTCGACGAT TTTATTTTAGCGAACGACTCGGTCTCCCTCTTGATGGCAAAAGCGACGTTACAACCTGGAACGACAGCAATTTTCCGTCA GTTGTTGAGCAAACAGTCAGGTGGGAACATTCAAGCGTTGAAACCAAAAGTCGAGTGGCTGAATGTTCGACAAGCAAATA CAGCGTTACTTGAATCAGGGGTGACACTCATCGCGGTCAATGACCGCTTGGATGTGGCGATGATGCTCGATTTGCCGCTT CAGGAAACAGACATGTTATATGTCGTCTGTCATGACGATGTATTTGAACGATTATCTTAA
Upstream 100 bases:
>100_bases GTCCTTCCTTTTTTCTTCTTATACGGAATCACCATCAAAATGGTTTCGTGAATCTTTTTGTGGTTACGTTTAGTATATAA GAGAGAAGGAGGGGGAAACA
Downstream 100 bases:
>100_bases GGAGTGAAACCATGCATAACGGAACGTTTATCCGAAAGATGACACGCATGCAAAACGTGCAACGGTGGGATGAATATGCC CCCCATTATCATGATAACGC
Product: Ion transport 2 domain protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MHILFRVWKGLAKLSFLNVVLASIGIIILGTVLGYVLEPETFGSLFDSFWWTMTTLTTVGYGDFYPSSVAGRWLGIFLFL FGIGIIGALIGKLVEIGATFQRLKREGRLVYRGEGHYVYIGWSPKTKKAIDEVLNYEPKAEIVLIDQLVEEPYVHDQVHF VSGDASDEAVLLQANVLKARRVAIFADARITETLLADGKSLLIASAVEALSSEYQVDLHTVVEVCEERNISKFKHVRVDD FILANDSVSLLMAKATLQPGTTAIFRQLLSKQSGGNIQALKPKVEWLNVRQANTALLESGVTLIAVNDRLDVAMMLDLPL QETDMLYVVCHDDVFERLS
Sequences:
>Translated_339_residues MHILFRVWKGLAKLSFLNVVLASIGIIILGTVLGYVLEPETFGSLFDSFWWTMTTLTTVGYGDFYPSSVAGRWLGIFLFL FGIGIIGALIGKLVEIGATFQRLKREGRLVYRGEGHYVYIGWSPKTKKAIDEVLNYEPKAEIVLIDQLVEEPYVHDQVHF VSGDASDEAVLLQANVLKARRVAIFADARITETLLADGKSLLIASAVEALSSEYQVDLHTVVEVCEERNISKFKHVRVDD FILANDSVSLLMAKATLQPGTTAIFRQLLSKQSGGNIQALKPKVEWLNVRQANTALLESGVTLIAVNDRLDVAMMLDLPL QETDMLYVVCHDDVFERLS >Mature_339_residues MHILFRVWKGLAKLSFLNVVLASIGIIILGTVLGYVLEPETFGSLFDSFWWTMTTLTTVGYGDFYPSSVAGRWLGIFLFL FGIGIIGALIGKLVEIGATFQRLKREGRLVYRGEGHYVYIGWSPKTKKAIDEVLNYEPKAEIVLIDQLVEEPYVHDQVHF VSGDASDEAVLLQANVLKARRVAIFADARITETLLADGKSLLIASAVEALSSEYQVDLHTVVEVCEERNISKFKHVRVDD FILANDSVSLLMAKATLQPGTTAIFRQLLSKQSGGNIQALKPKVEWLNVRQANTALLESGVTLIAVNDRLDVAMMLDLPL QETDMLYVVCHDDVFERLS
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=207, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003091 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 37708; Mature: 37708
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILFRVWKGLAKLSFLNVVLASIGIIILGTVLGYVLEPETFGSLFDSFWWTMTTLTTVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC YGDFYPSSVAGRWLGIFLFLFGIGIIGALIGKLVEIGATFQRLKREGRLVYRGEGHYVYI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEE GWSPKTKKAIDEVLNYEPKAEIVLIDQLVEEPYVHDQVHFVSGDASDEAVLLQANVLKAR ECCCCHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHHH RVAIFADARITETLLADGKSLLIASAVEALSSEYQVDLHTVVEVCEERNISKFKHVRVDD EEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHEECCCE FILANDSVSLLMAKATLQPGTTAIFRQLLSKQSGGNIQALKPKVEWLNVRQANTALLESG EEEECCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHEEECHHHHHHHHHCC VTLIAVNDRLDVAMMLDLPLQETDMLYVVCHDDVFERLS CEEEEECCCCCEEEEECCCCCCCCEEEEEECHHHHHHCC >Mature Secondary Structure MHILFRVWKGLAKLSFLNVVLASIGIIILGTVLGYVLEPETFGSLFDSFWWTMTTLTTVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC YGDFYPSSVAGRWLGIFLFLFGIGIIGALIGKLVEIGATFQRLKREGRLVYRGEGHYVYI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEE GWSPKTKKAIDEVLNYEPKAEIVLIDQLVEEPYVHDQVHFVSGDASDEAVLLQANVLKAR ECCCCHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHHH RVAIFADARITETLLADGKSLLIASAVEALSSEYQVDLHTVVEVCEERNISKFKHVRVDD EEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHEECCCE FILANDSVSLLMAKATLQPGTTAIFRQLLSKQSGGNIQALKPKVEWLNVRQANTALLESG EEEECCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHEEECHHHHHHHHHCC VTLIAVNDRLDVAMMLDLPLQETDMLYVVCHDDVFERLS CEEEEECCCCCEEEEECCCCCCCCEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]