Click here to switch to the map view.

The map label for this gene is yfbR [C]

Identifier: 229917135

GI number: 229917135

Start: 1380898

End: 1382025

Strand: Reverse

Name: yfbR [C]

Synonym: EAT1b_1409

Alternate gene names: 229917135

Gene position: 1382025-1380898 (Counterclockwise)

Preceding gene: 229917136

Following gene: 229917134

Centisome position: 46.07

GC content: 51.6

Gene sequence:

>1128_bases
ATGCATAACGGAACGTTTATCCGAAAGATGACACGCATGCAAAACGTGCAACGGTGGGATGAATATGCCCCCCATTATCA
TGATAACGCAGCGAGTCATAGCTTTCGTGTCGCGGTCTTTAGCTTGATCGCGGCTTATGTGGAAAAAGAGAACGGACGTG
AAGTCGATTTGCTTGATTTACTCGGGAAAGCCATTTTCCACGACATGAATGAAGTCCAGACGGGCCCGATCATGCACCGG
ACGAAAAAAGAACCGACCTTGATCGGTCACATCGAGCGTATGGAACGAACAGCGAGTCTCGGTCTTGTCGAGCTGCTGTC
GCAATCATTACGTCCTCACTTTCATCGTTTCGTGGTGGAAGCGGAAGATGATTCGTTCGAAGGTCGAATCGTGGACGGGA
TTGATTCGTTCGATGCGATGTTGTTCGTGCGACGAGAAGTCGCGCACGGCTCTCCGCACTTTGATGACAAGCTAGAAGAG
ATGAAAGCCGCACTCCGACATCATCCGATTGATTCGGTCCGCTGGCTGTTCGACCAGGTCGAGGCAGAAACGGATGTGTT
GCGATTCATCGAGAACGTCATGCGGATGGATAGTGTCCGTCGCTGGAAAGGTCGCTTTAACACGATTGACGACAACGATG
CGATTCATGGTTTCCGGGCTGCCGCGCTCGGTACGTTCAGTGGGCTCTTAGAGCGTGAGAAGTACGACGTCGATGTCGAT
GTCGCCGAACTCGTGGCTCGTCTTCTCTGTCACGATTTAGTTGAAGGGGTGACCGGAGACGTACTCGGTCCGGTCAAACA
TTCGACGCAAGAGACAGGGGCTGCATTCGAGGCATACGAGCGGGCAGAGAGTGAACGTCTTCTCGGATTGTTGCCGAAAT
ATATGCAACCGGCGTTCCGTCGATATATGGCCGACTCGAAAGACGATACGTATGAGGGAATGCTCGTCGACATGATGGAC
AAGCTCGATGCGCTCATCAAGATGAACATGGAGCGGAAGATGAACGGGGCCGAGTATGAGGTCACGTATCGCGAGCAACT
TCGTAAAGTCCAGATGCGTTATGAGAATCCAAGCATGATTTTCTTCCTCGCCTATATTTTGCACGACCTGGATTACGTCA
CAAGCTAA

Upstream 100 bases:

>100_bases
ATGTGGCGATGATGCTCGATTTGCCGCTTCAGGAAACAGACATGTTATATGTCGTCTGTCATGACGATGTATTTGAACGA
TTATCTTAAGGAGTGAAACC

Downstream 100 bases:

>100_bases
ATGAATTCACAGAGAAGTCGCGAACTTAGTGGTTCGCGGCTTTTTATATCATTTATTGACATATATCATTTAACGATATA
TACTCAATGTAAGAAATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MHNGTFIRKMTRMQNVQRWDEYAPHYHDNAASHSFRVAVFSLIAAYVEKENGREVDLLDLLGKAIFHDMNEVQTGPIMHR
TKKEPTLIGHIERMERTASLGLVELLSQSLRPHFHRFVVEAEDDSFEGRIVDGIDSFDAMLFVRREVAHGSPHFDDKLEE
MKAALRHHPIDSVRWLFDQVEAETDVLRFIENVMRMDSVRRWKGRFNTIDDNDAIHGFRAAALGTFSGLLEREKYDVDVD
VAELVARLLCHDLVEGVTGDVLGPVKHSTQETGAAFEAYERAESERLLGLLPKYMQPAFRRYMADSKDDTYEGMLVDMMD
KLDALIKMNMERKMNGAEYEVTYREQLRKVQMRYENPSMIFFLAYILHDLDYVTS

Sequences:

>Translated_375_residues
MHNGTFIRKMTRMQNVQRWDEYAPHYHDNAASHSFRVAVFSLIAAYVEKENGREVDLLDLLGKAIFHDMNEVQTGPIMHR
TKKEPTLIGHIERMERTASLGLVELLSQSLRPHFHRFVVEAEDDSFEGRIVDGIDSFDAMLFVRREVAHGSPHFDDKLEE
MKAALRHHPIDSVRWLFDQVEAETDVLRFIENVMRMDSVRRWKGRFNTIDDNDAIHGFRAAALGTFSGLLEREKYDVDVD
VAELVARLLCHDLVEGVTGDVLGPVKHSTQETGAAFEAYERAESERLLGLLPKYMQPAFRRYMADSKDDTYEGMLVDMMD
KLDALIKMNMERKMNGAEYEVTYREQLRKVQMRYENPSMIFFLAYILHDLDYVTS
>Mature_375_residues
MHNGTFIRKMTRMQNVQRWDEYAPHYHDNAASHSFRVAVFSLIAAYVEKENGREVDLLDLLGKAIFHDMNEVQTGPIMHR
TKKEPTLIGHIERMERTASLGLVELLSQSLRPHFHRFVVEAEDDSFEGRIVDGIDSFDAMLFVRREVAHGSPHFDDKLEE
MKAALRHHPIDSVRWLFDQVEAETDVLRFIENVMRMDSVRRWKGRFNTIDDNDAIHGFRAAALGTFSGLLEREKYDVDVD
VAELVARLLCHDLVEGVTGDVLGPVKHSTQETGAAFEAYERAESERLLGLLPKYMQPAFRRYMADSKDDTYEGMLVDMMD
KLDALIKMNMERKMNGAEYEVTYREQLRKVQMRYENPSMIFFLAYILHDLDYVTS

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0207 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022971
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43501; Mature: 43501

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCC
>Mature Secondary Structure
MHNGTFIRKMTRMQNVQRWDEYAPHYHDNAASHSFRVAVFSLIAAYVEKENGREVDLLDL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHH
LGKAIFHDMNEVQTGPIMHRTKKEPTLIGHIERMERTASLGLVELLSQSLRPHFHRFVVE
HHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEE
AEDDSFEGRIVDGIDSFDAMLFVRREVAHGSPHFDDKLEEMKAALRHHPIDSVRWLFDQV
CCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
EAETDVLRFIENVMRMDSVRRWKGRFNTIDDNDAIHGFRAAALGTFSGLLEREKYDVDVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
VAELVARLLCHDLVEGVTGDVLGPVKHSTQETGAAFEAYERAESERLLGLLPKYMQPAFR
HHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYMADSKDDTYEGMLVDMMDKLDALIKMNMERKMNGAEYEVTYREQLRKVQMRYENPSMI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHH
FFLAYILHDLDYVTS
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]