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The map label for this gene is ywhD [H]

Identifier: 229917116

GI number: 229917116

Start: 1361484

End: 1361987

Strand: Reverse

Name: ywhD [H]

Synonym: EAT1b_1390

Alternate gene names: 229917116

Gene position: 1361987-1361484 (Counterclockwise)

Preceding gene: 229917117

Following gene: 229917115

Centisome position: 45.4

GC content: 47.02

Gene sequence:

>504_bases
ATGAAAGACATTAATTTTAATATTATTTCAGACGATGCGACGGACGGACACGGTGGTTTTGGTGTCGGTTCGCTTAGTTT
AAATAACATGTCTCCGGTCATCATCGATGTCGAAGAAGGCGTTGCAACAATCGATATGGGAGCGATGCACGCCAAGTCTG
CCATCGAGAAACGGATTAAGTTTTTGACGGACCCGGAAGCGGTACCGAACGGGAAACCGTATTGGATCGTGTGGGTGACG
GTCGGTCGAAAACCGGAAGGCTTTTATTATGGCGGTGTCGCGGCATGTGACATGTTAGTTGACGTGGAAGCGAGACGGGG
TTATAAATTATTACCGTATCACGTTAATCAAATGGATAAATCGTTAAAGGGTCGGATTTTAATCGACATGATGGACGCTC
CGTCCCGCGACGTTTTAGCGAACTTCTTACAAGAACATCGCCCTGAGATTTGGGCAAACTCGACTGAACTTCATGCAGAG
CTCGAGCGTTTAGACGCTGAGTAA

Upstream 100 bases:

>100_bases
CAACAGATCGGTCCAGGGGGACGCTTTCAAATCGAATGGGTGTGACTCAGGATTGCCACCATCCTATGTCATTGTGTACA
GTAGAGAGGGAGGGTGGAAC

Downstream 100 bases:

>100_bases
AAAGATTGGACGAATTTTCGTCTCCAATCTTTTTTGTTTCAAGTTTTTGGGAATTTCAAGAGATTTTGTAACTGAAGAGA
TATTCAGTTGTAATTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKDINFNIISDDATDGHGGFGVGSLSLNNMSPVIIDVEEGVATIDMGAMHAKSAIEKRIKFLTDPEAVPNGKPYWIVWVT
VGRKPEGFYYGGVAACDMLVDVEARRGYKLLPYHVNQMDKSLKGRILIDMMDAPSRDVLANFLQEHRPEIWANSTELHAE
LERLDAE

Sequences:

>Translated_167_residues
MKDINFNIISDDATDGHGGFGVGSLSLNNMSPVIIDVEEGVATIDMGAMHAKSAIEKRIKFLTDPEAVPNGKPYWIVWVT
VGRKPEGFYYGGVAACDMLVDVEARRGYKLLPYHVNQMDKSLKGRILIDMMDAPSRDVLANFLQEHRPEIWANSTELHAE
LERLDAE
>Mature_167_residues
MKDINFNIISDDATDGHGGFGVGSLSLNNMSPVIIDVEEGVATIDMGAMHAKSAIEKRIKFLTDPEAVPNGKPYWIVWVT
VGRKPEGFYYGGVAACDMLVDVEARRGYKLLPYHVNQMDKSLKGRILIDMMDAPSRDVLANFLQEHRPEIWANSTELHAE
LERLDAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014852 [H]

Pfam domain/function: PF08741 YwhD [H]

EC number: NA

Molecular weight: Translated: 18590; Mature: 18590

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDINFNIISDDATDGHGGFGVGSLSLNNMSPVIIDVEEGVATIDMGAMHAKSAIEKRIK
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHH
FLTDPEAVPNGKPYWIVWVTVGRKPEGFYYGGVAACDMLVDVEARRGYKLLPYHVNQMDK
HCCCCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHEEEECCCCCCEEECEEHHHHCH
SLKGRILIDMMDAPSRDVLANFLQEHRPEIWANSTELHAELERLDAE
HCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKDINFNIISDDATDGHGGFGVGSLSLNNMSPVIIDVEEGVATIDMGAMHAKSAIEKRIK
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHH
FLTDPEAVPNGKPYWIVWVTVGRKPEGFYYGGVAACDMLVDVEARRGYKLLPYHVNQMDK
HCCCCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHEEEECCCCCCEEECEEHHHHCH
SLKGRILIDMMDAPSRDVLANFLQEHRPEIWANSTELHAELERLDAE
HCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]