| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917117
Identifier: 229917117
GI number: 229917117
Start: 1362043
End: 1363092
Strand: Reverse
Name: 229917117
Synonym: EAT1b_1391
Alternate gene names: NA
Gene position: 1363092-1362043 (Counterclockwise)
Preceding gene: 229917118
Following gene: 229917116
Centisome position: 45.44
GC content: 50.0
Gene sequence:
>1050_bases ATGAGAGGAATTTCGGTTTACTTAAGTGAGGAACTGACGTCTGCGTCCATTGATTGGATCGAACGTATGCGAGAGAGCGG ATTTACAAGCATCTTCACGTCGCTCCATATTCCGGAAGACGATTCGACGTTATATACAGGACGACTCGAGCAGTTAGGGA CGTTGGCAAGGCGTCTAAAGATGGAACTCGTGGCAGATATCGCCCCATCGTCTCTACAGGCACTCGGTAAGACCTGGGAC GATGCGCATACGCTGTTGGAGTGGGGCGTCACAGGGTTACGTGTTGACTATGGTGTCACACCGAAACAAGTGGCAGATTT GTCACGACATATGAAGGTCGCCCTCAATGCGAGTACGCTCACGGAAACGGAGCTTGAAGAGATGCATCGGTATGGATTAC AACGAAAACGCGTAGAAGCGTGGCATAATTTTTATCCTCGTCCGGAAACGGGGCTGGACCGTACATGGTTTGATGAAAAA AATCTTTGGCTCCGGTCAAAAGGAATCAAGGTACAAGCATTCATCCCTGGAGATGAACGGTTACGCGGCCCCCTTCATGA GACATTACCGACACTCGAGATGCACCGCCACCAATCTCCGTTTGCGTGTTATATCGATTTACAAGCGACGGTCGATCGAA TCTTGATTGGGGATCCTTGTATATCCAATCAGACGATGCGACAGTTTCGGGAGTACGACGAGGGCGTCATCGTTCTTCGA GCGACTATACGAAATCATGATGATTCGCTTATAACCAGTCACACGAATCGGATGGACCCAGCCCGGGACGTCATCCGTTC GGTAGAATCGAGAGCGTATGGACGACCTGGGGACCATTTGATTCAACCGCGAGATACAGAAGAACGAGTGCTCGGCAGTA TCACGATCGACAATGAACGTTACGGTCGTTATGCAGGGGAACTGCAAATAACGAAGCGGGATTTGCCGGCAGATGAGCGC GTCAATGTCATCGGAAGGATTATTGAAGAAGATCGTTCATTAATCCAACAGATCGGTCCAGGGGGACGCTTTCAAATCGA ATGGGTGTGA
Upstream 100 bases:
>100_bases TTTCTTCGGTTTCAAAGAAGAGATGGCGGACGGAATTTGACAAACAAAGATGGCTCGAGTCGAGTCATCTTTTTCTCTAC TTTCGGAAAGGTGGATTCAC
Downstream 100 bases:
>100_bases CTCAGGATTGCCACCATCCTATGTCATTGTGTACAGTAGAGAGGGAGGGTGGAACATGAAAGACATTAATTTTAATATTA TTTCAGACGATGCGACGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRGISVYLSEELTSASIDWIERMRESGFTSIFTSLHIPEDDSTLYTGRLEQLGTLARRLKMELVADIAPSSLQALGKTWD DAHTLLEWGVTGLRVDYGVTPKQVADLSRHMKVALNASTLTETELEEMHRYGLQRKRVEAWHNFYPRPETGLDRTWFDEK NLWLRSKGIKVQAFIPGDERLRGPLHETLPTLEMHRHQSPFACYIDLQATVDRILIGDPCISNQTMRQFREYDEGVIVLR ATIRNHDDSLITSHTNRMDPARDVIRSVESRAYGRPGDHLIQPRDTEERVLGSITIDNERYGRYAGELQITKRDLPADER VNVIGRIIEEDRSLIQQIGPGGRFQIEWV
Sequences:
>Translated_349_residues MRGISVYLSEELTSASIDWIERMRESGFTSIFTSLHIPEDDSTLYTGRLEQLGTLARRLKMELVADIAPSSLQALGKTWD DAHTLLEWGVTGLRVDYGVTPKQVADLSRHMKVALNASTLTETELEEMHRYGLQRKRVEAWHNFYPRPETGLDRTWFDEK NLWLRSKGIKVQAFIPGDERLRGPLHETLPTLEMHRHQSPFACYIDLQATVDRILIGDPCISNQTMRQFREYDEGVIVLR ATIRNHDDSLITSHTNRMDPARDVIRSVESRAYGRPGDHLIQPRDTEERVLGSITIDNERYGRYAGELQITKRDLPADER VNVIGRIIEEDRSLIQQIGPGGRFQIEWV >Mature_349_residues MRGISVYLSEELTSASIDWIERMRESGFTSIFTSLHIPEDDSTLYTGRLEQLGTLARRLKMELVADIAPSSLQALGKTWD DAHTLLEWGVTGLRVDYGVTPKQVADLSRHMKVALNASTLTETELEEMHRYGLQRKRVEAWHNFYPRPETGLDRTWFDEK NLWLRSKGIKVQAFIPGDERLRGPLHETLPTLEMHRHQSPFACYIDLQATVDRILIGDPCISNQTMRQFREYDEGVIVLR ATIRNHDDSLITSHTNRMDPARDVIRSVESRAYGRPGDHLIQPRDTEERVLGSITIDNERYGRYAGELQITKRDLPADER VNVIGRIIEEDRSLIQQIGPGGRFQIEWV
Specific function: Unknown
COG id: COG3589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40149; Mature: 40149
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGISVYLSEELTSASIDWIERMRESGFTSIFTSLHIPEDDSTLYTGRLEQLGTLARRLK CCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHH MELVADIAPSSLQALGKTWDDAHTLLEWGVTGLRVDYGVTPKQVADLSRHMKVALNASTL HHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEEECCCHH TETELEEMHRYGLQRKRVEAWHNFYPRPETGLDRTWFDEKNLWLRSKGIKVQAFIPGDER HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCEEEEECCCHHH LRGPLHETLPTLEMHRHQSPFACYIDLQATVDRILIGDPCISNQTMRQFREYDEGVIVLR HCCCHHHHCCHHHHHCCCCCEEEEEEEHHHHHHEEECCCCCCHHHHHHHHHCCCCEEEEE ATIRNHDDSLITSHTNRMDPARDVIRSVESRAYGRPGDHLIQPRDTEERVLGSITIDNER EEECCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCH YGRYAGELQITKRDLPADERVNVIGRIIEEDRSLIQQIGPGGRFQIEWV HCCEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MRGISVYLSEELTSASIDWIERMRESGFTSIFTSLHIPEDDSTLYTGRLEQLGTLARRLK CCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHH MELVADIAPSSLQALGKTWDDAHTLLEWGVTGLRVDYGVTPKQVADLSRHMKVALNASTL HHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEEECCCHH TETELEEMHRYGLQRKRVEAWHNFYPRPETGLDRTWFDEKNLWLRSKGIKVQAFIPGDER HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCEEEEECCCHHH LRGPLHETLPTLEMHRHQSPFACYIDLQATVDRILIGDPCISNQTMRQFREYDEGVIVLR HCCCHHHHCCHHHHHCCCCCEEEEEEEHHHHHHEEECCCCCCHHHHHHHHHCCCCEEEEE ATIRNHDDSLITSHTNRMDPARDVIRSVESRAYGRPGDHLIQPRDTEERVLGSITIDNER EEECCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCH YGRYAGELQITKRDLPADERVNVIGRIIEEDRSLIQQIGPGGRFQIEWV HCCEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA