| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is gltT [H]
Identifier: 229917115
GI number: 229917115
Start: 1360050
End: 1361327
Strand: Reverse
Name: gltT [H]
Synonym: EAT1b_1389
Alternate gene names: 229917115
Gene position: 1361327-1360050 (Counterclockwise)
Preceding gene: 229917116
Following gene: 229917114
Centisome position: 45.38
GC content: 49.69
Gene sequence:
>1278_bases ATGAGCGAAACGAAAAAAATCTTAATCGGTCTCGCGCTAGGTGTTGTTGTTGGTCTCGGATTGGCGGGCTTGCCGGATAA TGTTTATGAGATTGTGAATCCGTATATTTTATCTCCGGTCGGAACGATTTTTTTGAATTTAATTAAAATGTTAGTCGTAC CGATTGTCTTCTTCTCAATTATTTTAGGCGTCATGGGTCTCGGGGACCCGAAAGAACTAGGTCGAGTCGGGTCGAAGTCG ATTCTGTTCTTCTTAGCGACGACAGCGCTCGCAATCATGTTAGCGATGGGTGTTGCATCCGTCTTACAGCCAGGGGAGCG TGGGGACTTCCAAACGACAGGTCTTGAATTTGAATCGACAGCGACCGAGGAATCGTCTAATATCGTACAGACATTCGTCA ATATGATTCCAACGAATCCGATTACGGCGCTCGCTGAAGGAAACATGCTTCAAATCATCGTCTTTGCGGCATTGATTGGG TTTGCGCTGATTGCACTCGGGGACAAGGCGAAGACGTGGCGTCAATTCGTCAAACAAGGCGATCGCATCATGATGTACTT GATTCATCTTGTGATGAAGCTCGCTCCATACGGCGCATTCGCATTGATTGCTTCGGCAATCGGAGGCATCGGTCTCGACG CGGTTGTCGCTATGGCATGGTATATGATTGCCGTTGTCTTGACGTTATTCTTACATGCAACGATTGTCTACGGGGCAGCG GTTTACTTCATCGGGAAGATGAGCCCAGTGTTCTTCTTCAAGAACTTCTATGAGGCGATGACGTTCGCGTTCTCGACCTC TTCGTCAAACGCGACGCTTCCAGTATCGATGGAAGTCGCACAGAAAAAACTCGGTGTGCCGCGTTCGATTTCGTCGTTCG TACAGCCACTCGGAGCAACGGTCAACATGGACGGAACGGCAATCATGCAAGGGGTTGCGACGATTTTCATCGCGCAAGTG TTTGCAGCTGATCTAACGATGACTGAGTTGTTGACAGTCGTCATCACGGCGGTCCTCGCTTCGATCGGTACAGCGGGTGT ACCGGGAGTCGGACTTGTCATGCTTGCGCTCGTCCTTCAGTCAGTCAACTTACCGGTAGAGGGAATCGCCCTCATTATCG GGGTCGACCGTATTCTCGATATGCTTCACACATCTGTCAACATCACGGGGGATGCGGCATGTGCGGTTGTCGTTTCGAAA TTGGAAGAAAAACATCTACCACCAGTCGACGAAGACTCGTGGGATGAAGCAGGTGCGACTTCTTCATCATCGCTATGA
Upstream 100 bases:
>100_bases CAAGAGATTTTGTAACTGAAGAGATATTCAGTTGTAATTGTATGAAAATTCAGTATTATGATATACTGACTACATTGTGA AAAAAAGAAAGGGTGATACG
Downstream 100 bases:
>100_bases TATAGTGAAGGACCATGACGACATGTCATGGTCCTTATTTTGTGAAGAGAAAGAGTGATGATTATGGAATGGGAACTGCT CCCGCTCCCTTTATTTTTGA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSETKKILIGLALGVVVGLGLAGLPDNVYEIVNPYILSPVGTIFLNLIKMLVVPIVFFSIILGVMGLGDPKELGRVGSKS ILFFLATTALAIMLAMGVASVLQPGERGDFQTTGLEFESTATEESSNIVQTFVNMIPTNPITALAEGNMLQIIVFAALIG FALIALGDKAKTWRQFVKQGDRIMMYLIHLVMKLAPYGAFALIASAIGGIGLDAVVAMAWYMIAVVLTLFLHATIVYGAA VYFIGKMSPVFFFKNFYEAMTFAFSTSSSNATLPVSMEVAQKKLGVPRSISSFVQPLGATVNMDGTAIMQGVATIFIAQV FAADLTMTELLTVVITAVLASIGTAGVPGVGLVMLALVLQSVNLPVEGIALIIGVDRILDMLHTSVNITGDAACAVVVSK LEEKHLPPVDEDSWDEAGATSSSSL
Sequences:
>Translated_425_residues MSETKKILIGLALGVVVGLGLAGLPDNVYEIVNPYILSPVGTIFLNLIKMLVVPIVFFSIILGVMGLGDPKELGRVGSKS ILFFLATTALAIMLAMGVASVLQPGERGDFQTTGLEFESTATEESSNIVQTFVNMIPTNPITALAEGNMLQIIVFAALIG FALIALGDKAKTWRQFVKQGDRIMMYLIHLVMKLAPYGAFALIASAIGGIGLDAVVAMAWYMIAVVLTLFLHATIVYGAA VYFIGKMSPVFFFKNFYEAMTFAFSTSSSNATLPVSMEVAQKKLGVPRSISSFVQPLGATVNMDGTAIMQGVATIFIAQV FAADLTMTELLTVVITAVLASIGTAGVPGVGLVMLALVLQSVNLPVEGIALIIGVDRILDMLHTSVNITGDAACAVVVSK LEEKHLPPVDEDSWDEAGATSSSSL >Mature_424_residues SETKKILIGLALGVVVGLGLAGLPDNVYEIVNPYILSPVGTIFLNLIKMLVVPIVFFSIILGVMGLGDPKELGRVGSKSI LFFLATTALAIMLAMGVASVLQPGERGDFQTTGLEFESTATEESSNIVQTFVNMIPTNPITALAEGNMLQIIVFAALIGF ALIALGDKAKTWRQFVKQGDRIMMYLIHLVMKLAPYGAFALIASAIGGIGLDAVVAMAWYMIAVVLTLFLHATIVYGAAV YFIGKMSPVFFFKNFYEAMTFAFSTSSSNATLPVSMEVAQKKLGVPRSISSFVQPLGATVNMDGTAIMQGVATIFIAQVF AADLTMTELLTVVITAVLASIGTAGVPGVGLVMLALVLQSVNLPVEGIALIIGVDRILDMLHTSVNITGDAACAVVVSKL EEKHLPPVDEDSWDEAGATSSSSL
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=456, Percent_Identity=31.359649122807, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI169790839, Length=426, Percent_Identity=29.81220657277, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI4827012, Length=281, Percent_Identity=38.4341637010676, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI194239697, Length=429, Percent_Identity=29.6037296037296, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI21314632, Length=403, Percent_Identity=30.5210918114144, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI5032093, Length=373, Percent_Identity=33.7801608579088, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI66773030, Length=454, Percent_Identity=29.295154185022, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI223468566, Length=277, Percent_Identity=35.7400722021661, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI223468564, Length=248, Percent_Identity=36.2903225806452, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI262359914, Length=349, Percent_Identity=25.7879656160458, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI301601644, Length=181, Percent_Identity=39.2265193370166, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1790514, Length=411, Percent_Identity=37.4695863746959, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1789947, Length=397, Percent_Identity=31.4861460957179, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788024, Length=431, Percent_Identity=29.2343387470998, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1789473, Length=379, Percent_Identity=26.3852242744063, Blast_Score=99, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71983106, Length=458, Percent_Identity=32.7510917030568, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI71983099, Length=458, Percent_Identity=32.7510917030568, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI193206505, Length=440, Percent_Identity=34.3181818181818, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17537407, Length=441, Percent_Identity=34.0136054421769, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71996953, Length=457, Percent_Identity=31.7286652078775, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI193206654, Length=455, Percent_Identity=31.6483516483516, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17541374, Length=413, Percent_Identity=30.9927360774818, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24583025, Length=416, Percent_Identity=30.2884615384615, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17137668, Length=416, Percent_Identity=30.2884615384615, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24583023, Length=416, Percent_Identity=30.2884615384615, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI281360483, Length=474, Percent_Identity=27.6371308016878, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI17137666, Length=474, Percent_Identity=27.6371308016878, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI281360481, Length=464, Percent_Identity=27.801724137931, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44864; Mature: 44733
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETKKILIGLALGVVVGLGLAGLPDNVYEIVNPYILSPVGTIFLNLIKMLVVPIVFFSI CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILGVMGLGDPKELGRVGSKSILFFLATTALAIMLAMGVASVLQPGERGDFQTTGLEFEST HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ATEESSNIVQTFVNMIPTNPITALAEGNMLQIIVFAALIGFALIALGDKAKTWRQFVKQG CCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DRIMMYLIHLVMKLAPYGAFALIASAIGGIGLDAVVAMAWYMIAVVLTLFLHATIVYGAA CHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYFIGKMSPVFFFKNFYEAMTFAFSTSSSNATLPVSMEVAQKKLGVPRSISSFVQPLGAT HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCC VNMDGTAIMQGVATIFIAQVFAADLTMTELLTVVITAVLASIGTAGVPGVGLVMLALVLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVNLPVEGIALIIGVDRILDMLHTSVNITGDAACAVVVSKLEEKHLPPVDEDSWDEAGAT HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SSSSL CCCCC >Mature Secondary Structure SETKKILIGLALGVVVGLGLAGLPDNVYEIVNPYILSPVGTIFLNLIKMLVVPIVFFSI CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILGVMGLGDPKELGRVGSKSILFFLATTALAIMLAMGVASVLQPGERGDFQTTGLEFEST HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ATEESSNIVQTFVNMIPTNPITALAEGNMLQIIVFAALIGFALIALGDKAKTWRQFVKQG CCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DRIMMYLIHLVMKLAPYGAFALIASAIGGIGLDAVVAMAWYMIAVVLTLFLHATIVYGAA CHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYFIGKMSPVFFFKNFYEAMTFAFSTSSSNATLPVSMEVAQKKLGVPRSISSFVQPLGAT HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCC VNMDGTAIMQGVATIFIAQVFAADLTMTELLTVVITAVLASIGTAGVPGVGLVMLALVLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVNLPVEGIALIIGVDRILDMLHTSVNITGDAACAVVVSKLEEKHLPPVDEDSWDEAGAT HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SSSSL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]