Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is capK [H]

Identifier: 229917101

GI number: 229917101

Start: 1344872

End: 1346224

Strand: Reverse

Name: capK [H]

Synonym: EAT1b_1375

Alternate gene names: 229917101

Gene position: 1346224-1344872 (Counterclockwise)

Preceding gene: 229917102

Following gene: 229917100

Centisome position: 44.88

GC content: 45.16

Gene sequence:

>1353_bases
ATGGCAGGGTTTGCGCTTCGTGATTTATACATGAAATCACCGATTCGATTACAACAATGGATGACGACATTGTATGGAAT
GAAACTATGGCAAGAACGGTACGGACGCACATATGAGCGTGAGTTAGTCGTTTTAGCCAATCGTCCCAAAGATGGGGCAG
TCGTTGCAGCCGATCAATTGAAGCGACTCAATGCGTTTCTCGAATTTTGTGCGACGAACAATGCATATTATCAAAAACTG
TTTGAAGAAAACGAGATTGTTCTTCCCCTCCAATCGATGGAAGAGTTGAAGCGCATCCCGATCCTCGAAAAAGAAACAGT
TCGTAAAAATCCAGACATCCATTCGAACATCAAAACAGACATTCTTGGACGGACCGGTGGAACGACAGGGACGTCCCTAC
AAGTTCATTTTACGAAAGAAGACTATCAAAGACGTATGGCCCACGTTGACTTTTTCAAAGCACAACACGGGTTTGTCAGA
GGAATGAAACGAGCCAGTTTTACAGGACGGAAAATTTGTAATCCGAATCAAGAAAAGCCTGTATTTTGGCGCTACAATCG
ACCGCTCAATCAAATGCTATTCTCGCTCTACCATGTCAACCCTCAGACTATCCCTCATTACATCGACGCATTAAATCGAT
TCAAGCCAATTGTATTAGACAGTGCACCGTCTGCCATGATTGAAATCGCGAAATACATTAAAGAAAATCAGGTTCCACTT
GAATTTCAATTACTGGCTATTTTTCCGACAGCCGAAACGATTACGCCTCAAGGAAGAGCCATCTTAGAAGAGGCGTTTGG
GGCCCCGGTCTTTGATCAGTACGCGTCTTCGGAAGGGGCACCGATTTTAACGGAATGTACCCATGGCAATATGCATCTCC
ACCATGAAACAGGCGTGATCGAGTCGTATGGGGATCACGAGGAAATTTTAGTGACGAGCTTTACGACCCATGGGACACCG
CTCGTTCGTTACCGGATTGGCGATCGGATGAAAATTGGAGAGGGGACATGTGCTTGTGGACAGGGAGGAACATTCGTCAC
TTCCATTGAGGGACGCGAAAGCAATTATGTACTCACTCCGAACAAACAAAAAATCTACGAAGGAGATTTGACGACCGTTG
TCCGAGTGTTACCCAACTCGGTCATCCAAACGCAGTATCGGCAACATGATTTGTATCATATCGAATTAAAATACGTCCCG
GATCTTGAACGTTTCAAGCCAGAACATGAAGAGATTATGAGGAGCGAGCTTGAACTACTGTTCGGCAAAGAGGTCGTGAT
TACGTTGACCGCCGTGCAATCGATTCCTCGGGGACCGAATGGAAAAGTCATTGTGATTGATAAAACCGCATAA

Upstream 100 bases:

>100_bases
TGAAAGTTCTTTTACGAGATGTGAAAAGCATCAAGAAAGAAAAGAACGGAAAAGTCCGAGTCGTGAAACGACTCTACACT
TAGCGAGAGGAGACTACACC

Downstream 100 bases:

>100_bases
TTCCGAATCTCAGGAGGCAGATGGACATGGATAAACTCATCTCAGAATCACGTACAACACGAAAAACCATTGCCAATCGT
CACGTAGCTGTTGTCGGACT

Product: Coenzyme F390 synthetase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKL
FEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVR
GMKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL
EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTP
LVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVP
DLERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA

Sequences:

>Translated_450_residues
MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKL
FEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVR
GMKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL
EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTP
LVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVP
DLERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA
>Mature_449_residues
AGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKLF
EENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRG
MKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPLE
FQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTPL
VRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPD
LERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51511; Mature: 51380

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHH
KRLNAFLEFCATNNAYYQKLFEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTD
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHH
ILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRGMKRASFTGRKICNPNQEKP
CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCE
EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVI
EEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
ESYGDHEEILVTSFTTHGTPLVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTP
CCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCEECCCCCEEEEEECCCCCCEEECC
NKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPDLERFKPEHEEIMRSELELL
CCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHCCHHHHHHHHHHHHH
FGKEVVITLTAVQSIPRGPNGKVIVIDKTA
CCCEEEEEEEEHHHCCCCCCCCEEEEECCC
>Mature Secondary Structure 
AGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQL
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHH
KRLNAFLEFCATNNAYYQKLFEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTD
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHH
ILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRGMKRASFTGRKICNPNQEKP
CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCE
EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVI
EEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
ESYGDHEEILVTSFTTHGTPLVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTP
CCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCEECCCCCEEEEEECCCCCCEEECC
NKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPDLERFKPEHEEIMRSELELL
CCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHCCHHHHHHHHHHHHH
FGKEVVITLTAVQSIPRGPNGKVIVIDKTA
CCCEEEEEEEEHHHCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]