Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ydjZ [C]

Identifier: 229917082

GI number: 229917082

Start: 1325645

End: 1326487

Strand: Reverse

Name: ydjZ [C]

Synonym: EAT1b_1356

Alternate gene names: 229917082

Gene position: 1326487-1325645 (Counterclockwise)

Preceding gene: 229917083

Following gene: 229917081

Centisome position: 44.22

GC content: 51.48

Gene sequence:

>843_bases
ATGAAAGAACGACATTCGATTTATCTTGGATATGGATTGGGGCTTGTCGCGCTCAGTCTGTTGCCGTTCGTCGTCTTGCC
TTCCCTCTTACTGCCGTACCAGCTCGGTTGGACGGGCATTGTCTTACTCGCTCTCTCGGTCGGGTTACTACGGGCGATTC
GGGACGGCTCGAATGTCATTTTGAAACAGATGTGGAAGATCACGTTCTCGCTCTTCTTAATTTTCGTTCTCGTCTATTAT
GTCTCGTTCGGACTCGTCCTTTATGACACATACGGGTTGGATCGTCTATTAGCACAATATGAACGACAGGCGGTCTGGGT
GTTTGCGGCATTTAGCTTTTTACAACCGATTGCCTTGCCGGTCCCGGAAGCGGTCAGTGTGCCGATTGGGAGTGTCGCGC
TCGGACCGTTTCGTGCGGCTTTAGTCGGAAGCATCTCGACTACGCTTGGCATCTTTGTCATGTATGGGTTGGCCCGGTTT
GGCCGAGGACGCATGATTCGTTGGGTCGATGAAGAGAAACTGAAGACATACGATCGATATGTCGATCGGTACGGTCTTGG
TGTATTGCTCGTGTTGTTCATCATTCCGATTTTGCCGGATGAGGTCATCTGTCTCGCTGCTGGGTTTAGTCGCGTGCCAT
TCCCGCGTTTTGCGGGCATCGCGTTCGGGGCAAAACTCGTCACGTCGTTCGGGCTTGCCTACTCTGTCTCCATCGGACAA
TTGTTTATGACCGATTCGAGTCCCATTGCCATCGCCTCTGTCATGGCAAGTGTAGTCGTCTTGATTCTCGCGTTCGTTTG
GCGCAAACGAAAAAAAGGGGATTCGAACGGGACACAAGAATAA

Upstream 100 bases:

>100_bases
TTCTACGTCAAAAGCATGAGAGGGAAGGTGCCCTCGGCAGGATACATCCCCTTCACTTTCTGGGTACACTAGAAGTAGAA
CGGGGAGAGGGTGATGGCTC

Downstream 100 bases:

>100_bases
AGTAAAGACGATCTATAGAGAGGAAGACAAGATGCGACAAGACAATGAAGTGGTCATTCGACCGATTGAAAAACAAGACT
TAGTCCGACTATGGGAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY
VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF
GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ
LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE

Sequences:

>Translated_280_residues
MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY
VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF
GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ
LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE
>Mature_280_residues
MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY
VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF
GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ
LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30876; Mature: 30876

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA