| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is tal
Identifier: 229917074
GI number: 229917074
Start: 1317792
End: 1318442
Strand: Reverse
Name: tal
Synonym: EAT1b_1348
Alternate gene names: 229917074
Gene position: 1318442-1317792 (Counterclockwise)
Preceding gene: 229917075
Following gene: 229917073
Centisome position: 43.95
GC content: 49.16
Gene sequence:
>651_bases ATGCGTTTTTTCATTGACACAGCAAATGTGGAAGACATTAAAAAAGCTCATCAAATGGGCGTCATTGGAGGCGTGACGAC GAATCCATCGCTCGTCGCCAAAGAAGGTGTCGATTTCCATACAAGACTTCGTGAAATCTGTGAGATCGTCGGGGATCTCT CGGTCAGCGCCGAAGTTATTGCACTTGATGCGCCGGGTATGGTGGAAGAAGGAAAGGAACTTGCCGCCATCGCGCCGAAT ATTACGGTAAAGGTACCGATGACACCAGCGGGGATGGAAGCGGTAAAACAGTTCAAAGAGCTTGGGATCAAGACGAATGT CACGCTCATCTTTAACGCCAACCAGGCGTTACTTGCGGCACGCGCCGGAGCATCATACGTTTCTCCATTCATCGGACGCT TGGATGACATCGGACAAGATGGGCTCGATTTAGTGGAAACTATTGCGAACATCTTTGCAATCCATGGCATCGAGACAGAA ATCATCGCAGCATCTGTGCGTCACCCGGTTCACGTGACAAAAGCTGCACTTCTCGGGGCTGACATTGCGACAGTCCCTTA CAAAGTCATCGAACAGATGATGAAACATCCGCTCACAGACAAAGGTATTGAGCAGTTCTTAGCGGATTGGAACAACGCTC AATCCAAATAA
Upstream 100 bases:
>100_bases ATATCACCGTTTGTCGAATCTGACAAAGGGAGTAGTAATTCGACTAGTCTTTCCTCATAATAGAGATTGTAAGCGATCAC AAATTAAGGAGGAGACACAT
Downstream 100 bases:
>100_bases GTCCGTCGTAGAAAGGTTTTGATCAGCGTGGAAATTCTCCATATCGTTGGGCAGCAAAAATTAGAAGGAACCGTCGAGAT TAGCGGGGCGAAACAGAGTG
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK
Sequences:
>Translated_216_residues MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK >Mature_216_residues MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily
Homologues:
Organism=Escherichia coli, GI1790382, Length=214, Percent_Identity=37.8504672897196, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI87081788, Length=214, Percent_Identity=34.1121495327103, Blast_Score=134, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6321480, Length=186, Percent_Identity=27.9569892473118, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_EXISA (C4KYW2)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002885720.1 - ProteinModelPortal: C4KYW2 - GeneID: 7870316 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_1348 - OMA: PNITVKI - ProtClustDB: CLSK2489937 - GO: GO:0005737 - HAMAP: MF_00494 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - TIGRFAMs: TIGR00875
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 23197; Mature: 23197
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 84-84
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVI CEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEE ALDAPGMVEEGKELAAIAPNITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAA EECCCCHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH RAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETEIIAASVRHPVHVTKAALLGA HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC DIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK CHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVI CEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEE ALDAPGMVEEGKELAAIAPNITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAA EECCCCHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH RAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETEIIAASVRHPVHVTKAALLGA HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC DIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK CHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA