Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ywlE [H]

Identifier: 229917061

GI number: 229917061

Start: 1305405

End: 1305905

Strand: Reverse

Name: ywlE [H]

Synonym: EAT1b_1335

Alternate gene names: 229917061

Gene position: 1305905-1305405 (Counterclockwise)

Preceding gene: 229917062

Following gene: 229917060

Centisome position: 43.53

GC content: 50.7

Gene sequence:

>501_bases
ATGTCAATGAAACGCGTATTATTCATATGTAGTGGCAACACGTGCCGAAGCCCGATGGCGATGGCCTTGCTCCGTTCGAA
GATGACCGGGGACGAGTTTGATATTCGCTCAGCCGGTCTACGGACGATGCAAGGATTCGATGCTTCTGAAAATGCACTGC
AAGTTCTCAGAGAACGTGGGATTGAGCTCGATCATGTCACCCAGACGTTCGATGAAGTGTTAGGGAATTGGGCGGATATC
ATCTTGACGATGACACGCGCACACCGTGAACAAATTCGGGATACATACCCGGATTTGTCGGAGCGGACGTACACGCTCTA
TGAATTCGTGACGGGACTCGAGCGAGACATCAACGACCCGTTTGGCGGTTCGATGAATGTGTATCGCCAAGTGCGAAACG
AGCTCGAACCACTCGTGAATCGACTTGTGTTAAAATTAACGAATGATGGGTCAAAGGTGACGAAACCACCGAGACGCCTA
CCAAAGAAGACGGGGGAATGA

Upstream 100 bases:

>100_bases
CGGAGTTGCATTAGCCGTCTATAACCGTTTATACAAAGCGGCGGGCGGAAAGGTTGTGCACCCGACGAAAGATGCCTAAA
GACATAGAGGAGGACACGCG

Downstream 100 bases:

>100_bases
ACGAATGAAAATTGCAATTGGCGCTGATCATGGCGGCTTCAACTTGAAGAAAGAAATCGTAGCCTTGCTTGAGGAACTCG
GACATGAGTATAAAGATTTC

Product: protein tyrosine phosphatase

Products: NA

Alternate protein names: LMPTP [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADI
ILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRL
PKKTGE

Sequences:

>Translated_166_residues
MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADI
ILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRL
PKKTGE
>Mature_165_residues
SMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADII
LTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLP
KKTGE

Specific function: Dephosphorylates the phosphotyrosine-containing proteins. Involved in ethanol stress resistance [H]

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 19016; Mature: 18885

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERG
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC
IELDHVTQTFDEVLGNWADIILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
FGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLPKKTGE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERG
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC
IELDHVTQTFDEVLGNWADIILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
FGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLPKKTGE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798145; 9384377 [H]