| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ywlE [H]
Identifier: 229917061
GI number: 229917061
Start: 1305405
End: 1305905
Strand: Reverse
Name: ywlE [H]
Synonym: EAT1b_1335
Alternate gene names: 229917061
Gene position: 1305905-1305405 (Counterclockwise)
Preceding gene: 229917062
Following gene: 229917060
Centisome position: 43.53
GC content: 50.7
Gene sequence:
>501_bases ATGTCAATGAAACGCGTATTATTCATATGTAGTGGCAACACGTGCCGAAGCCCGATGGCGATGGCCTTGCTCCGTTCGAA GATGACCGGGGACGAGTTTGATATTCGCTCAGCCGGTCTACGGACGATGCAAGGATTCGATGCTTCTGAAAATGCACTGC AAGTTCTCAGAGAACGTGGGATTGAGCTCGATCATGTCACCCAGACGTTCGATGAAGTGTTAGGGAATTGGGCGGATATC ATCTTGACGATGACACGCGCACACCGTGAACAAATTCGGGATACATACCCGGATTTGTCGGAGCGGACGTACACGCTCTA TGAATTCGTGACGGGACTCGAGCGAGACATCAACGACCCGTTTGGCGGTTCGATGAATGTGTATCGCCAAGTGCGAAACG AGCTCGAACCACTCGTGAATCGACTTGTGTTAAAATTAACGAATGATGGGTCAAAGGTGACGAAACCACCGAGACGCCTA CCAAAGAAGACGGGGGAATGA
Upstream 100 bases:
>100_bases CGGAGTTGCATTAGCCGTCTATAACCGTTTATACAAAGCGGCGGGCGGAAAGGTTGTGCACCCGACGAAAGATGCCTAAA GACATAGAGGAGGACACGCG
Downstream 100 bases:
>100_bases ACGAATGAAAATTGCAATTGGCGCTGATCATGGCGGCTTCAACTTGAAGAAAGAAATCGTAGCCTTGCTTGAGGAACTCG GACATGAGTATAAAGATTTC
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: LMPTP [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADI ILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRL PKKTGE
Sequences:
>Translated_166_residues MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADI ILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRL PKKTGE >Mature_165_residues SMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERGIELDHVTQTFDEVLGNWADII LTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDPFGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLP KKTGE
Specific function: Dephosphorylates the phosphotyrosine-containing proteins. Involved in ethanol stress resistance [H]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 19016; Mature: 18885
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERG CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC IELDHVTQTFDEVLGNWADIILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLPKKTGE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SMKRVLFICSGNTCRSPMAMALLRSKMTGDEFDIRSAGLRTMQGFDASENALQVLRERG CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC IELDHVTQTFDEVLGNWADIILTMTRAHREQIRDTYPDLSERTYTLYEFVTGLERDINDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FGGSMNVYRQVRNELEPLVNRLVLKLTNDGSKVTKPPRRLPKKTGE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7798145; 9384377 [H]