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The map label for this gene is ugpE [H]

Identifier: 229917004

GI number: 229917004

Start: 1255195

End: 1256004

Strand: Reverse

Name: ugpE [H]

Synonym: EAT1b_1278

Alternate gene names: 229917004

Gene position: 1256004-1255195 (Counterclockwise)

Preceding gene: 229917005

Following gene: 229917003

Centisome position: 41.87

GC content: 50.86

Gene sequence:

>810_bases
ATGAGGTTACGGAATATCGGCGTCTATGTCTTACTCGTTTTGTGTGCTGTTGTCATGCTGTTTCCGATTGCCTATGCGTT
TTCGATCAGTCTGATGGACGGGAAGGAAGTGCTCCAGGGACATCTCCTTCCGCGTGAACCTTCATTGGAAAACTATGTGG
CCGCGTTCGAGCGTATCCCGATGATGACGTATCTGCTCAACAGTTTGGTCGTCGCGCTTCTCGTGATGGTCGGACAGGTC
GTCTTGTCGAGTCTCGCGGCATTCGCATTCGTCTTTATCGACTTTAAAGGAAAAGGGCTCATCTTCATGCTCTTCCTGGC
GACGATGATGGTGCCATGGGAAGCGACGATGGTACCGAACTTTTTGACGATTCAGTCGCTCGGTTGGCTGAATAGCGTAT
GGGGACTGTCTGTGCCGTTCTTCGCACTCGCGTTCGGGACGTTCTTACTTCGGCAACAGTTCAAAACGATTCCGTACGAA
ATGTACGAGGCGTCCCAAATTGCTGGGATCAGTCGCTTCCGATTCTTTTGGAACGTCGTCTTGCCGGTCTCGAAGACACC
GCTCGTTACATTGTCGGTGTATAGCTTTTTGACGACTTGGAATATGTACTTATGGCCGCTTCTCGTCACGAACACGGAAC
AGGCGCGAACGGTCCAAATCGGCATCAAACAGATGCAGTCGAACGAAGTCGCCTCGGATTGGGGCGTCGTCATGGCGGCA
GTCATCTTGATCATCATTCCGACACTTGTATTGTTGTTCGCAGGACAAAAGCACTTGCAAGAAGGTTTGACGCAAGGCGC
TATCAAATAA

Upstream 100 bases:

>100_bases
ACGTTGGCAGTGCCAGCGCCCAGGCCGTGCTCTTATTCATCGCTGTCCTTCTGTTGACGTGGCTCCAGTTCAAACTGGTC
GAAAGGAAGGTGCATTACCA

Downstream 100 bases:

>100_bases
TAGGGGGATATGACAAATGAAAAAATTAGGATTATTCGCAGGGTTGGCAAGTTCGGTGTTATTACTCGGGGCATGTGGCA
GTGAAGAAGCGGCACCCGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRLRNIGVYVLLVLCAVVMLFPIAYAFSISLMDGKEVLQGHLLPREPSLENYVAAFERIPMMTYLLNSLVVALLVMVGQV
VLSSLAAFAFVFIDFKGKGLIFMLFLATMMVPWEATMVPNFLTIQSLGWLNSVWGLSVPFFALAFGTFLLRQQFKTIPYE
MYEASQIAGISRFRFFWNVVLPVSKTPLVTLSVYSFLTTWNMYLWPLLVTNTEQARTVQIGIKQMQSNEVASDWGVVMAA
VILIIIPTLVLLFAGQKHLQEGLTQGAIK

Sequences:

>Translated_269_residues
MRLRNIGVYVLLVLCAVVMLFPIAYAFSISLMDGKEVLQGHLLPREPSLENYVAAFERIPMMTYLLNSLVVALLVMVGQV
VLSSLAAFAFVFIDFKGKGLIFMLFLATMMVPWEATMVPNFLTIQSLGWLNSVWGLSVPFFALAFGTFLLRQQFKTIPYE
MYEASQIAGISRFRFFWNVVLPVSKTPLVTLSVYSFLTTWNMYLWPLLVTNTEQARTVQIGIKQMQSNEVASDWGVVMAA
VILIIIPTLVLLFAGQKHLQEGLTQGAIK
>Mature_269_residues
MRLRNIGVYVLLVLCAVVMLFPIAYAFSISLMDGKEVLQGHLLPREPSLENYVAAFERIPMMTYLLNSLVVALLVMVGQV
VLSSLAAFAFVFIDFKGKGLIFMLFLATMMVPWEATMVPNFLTIQSLGWLNSVWGLSVPFFALAFGTFLLRQQFKTIPYE
MYEASQIAGISRFRFFWNVVLPVSKTPLVTLSVYSFLTTWNMYLWPLLVTNTEQARTVQIGIKQMQSNEVASDWGVVMAA
VILIIIPTLVLLFAGQKHLQEGLTQGAIK

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=36.3295880149813, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1787571, Length=273, Percent_Identity=30.03663003663, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790464, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30237; Mature: 30237

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA