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The map label for this gene is ugpA [H]

Identifier: 229917005

GI number: 229917005

Start: 1256001

End: 1256906

Strand: Reverse

Name: ugpA [H]

Synonym: EAT1b_1279

Alternate gene names: 229917005

Gene position: 1256906-1256001 (Counterclockwise)

Preceding gene: 229917006

Following gene: 229917004

Centisome position: 41.9

GC content: 51.88

Gene sequence:

>906_bases
ATGACAGTCGCCTTACCGAGAGAGAAAGTTCGGACACGGCTATCTGACGCAGCGAGCGGATTGTTGTACTTGTCTCCGTC
CATCATCTTGTTCGGTGTCTTTCTCGTCTATCCGCTGTTGCGAACAATCTATTTAAGCTTTTTCCGGACCGACACACAAG
GAACGCCGCTCGAATTTGTCGGAGTCGGTCATTACAGCACGCTGTTCACGAGCGCCGCGTTTTGGCAAAGCATTCAGGCG
ACAGTCGGATTCGTCCTCTTGACGGTCCCGCTCACGATTTTGATTGCGCTCGGTCTCGCACTCCTCGCCAATGAGAAACT
GAAAGGGATCGGTATTTTTCGGACGGCGTTCTCGGCGACCATGGGGATGAGCGTCGCGGCGTCATCGGTCATTTGGATGT
TCATGTACAATCCGTCAATCGGTATCTTCAACCGGTTCCTCGAGGCAGTGGGGGCAAGTGGTGTACAGTGGCTCCTCGAT
CCACAATATGCGCTCCTTTCCGTGTCACTTGCGACCGTTTGGATGAACATCGGCTTTACGTTCTTGATTTTACTCGGCGG
TCTGCAAAACATCGATCGGACGTTATATGAGAGCGCGGACATTGCCGGGACGAGTTATTGGACGCAACTTCGGGCCATCA
CCATCCCGATGTTGTCGCCGACACTTTTCTTTGTCGGGATCATCTCGCTCATCAACGCTTTCCAGACGTTTGGACAGATT
GATTTATTGACGAAAGGTGGACCGACGAATGCGACGAATGTCATCGTCTATGCCATCTACAAAGATGCGTTTATCAACTA
TAACGTTGGCAGTGCCAGCGCCCAGGCCGTGCTCTTATTCATCGCTGTCCTTCTGTTGACGTGGCTCCAGTTCAAACTGG
TCGAAAGGAAGGTGCATTACCAATGA

Upstream 100 bases:

>100_bases
CGTGTTATGTGGATCCGAAACAGATGTCGCTATTTGATACGAACGGGCAGCGCATCGAGCCACGACAACCGAAACTGTTT
GAGGCGTTGGAGGTGTTTCA

Downstream 100 bases:

>100_bases
GGTTACGGAATATCGGCGTCTATGTCTTACTCGTTTTGTGTGCTGTTGTCATGCTGTTTCCGATTGCCTATGCGTTTTCG
ATCAGTCTGATGGACGGGAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTVALPREKVRTRLSDAASGLLYLSPSIILFGVFLVYPLLRTIYLSFFRTDTQGTPLEFVGVGHYSTLFTSAAFWQSIQA
TVGFVLLTVPLTILIALGLALLANEKLKGIGIFRTAFSATMGMSVAASSVIWMFMYNPSIGIFNRFLEAVGASGVQWLLD
PQYALLSVSLATVWMNIGFTFLILLGGLQNIDRTLYESADIAGTSYWTQLRAITIPMLSPTLFFVGIISLINAFQTFGQI
DLLTKGGPTNATNVIVYAIYKDAFINYNVGSASAQAVLLFIAVLLLTWLQFKLVERKVHYQ

Sequences:

>Translated_301_residues
MTVALPREKVRTRLSDAASGLLYLSPSIILFGVFLVYPLLRTIYLSFFRTDTQGTPLEFVGVGHYSTLFTSAAFWQSIQA
TVGFVLLTVPLTILIALGLALLANEKLKGIGIFRTAFSATMGMSVAASSVIWMFMYNPSIGIFNRFLEAVGASGVQWLLD
PQYALLSVSLATVWMNIGFTFLILLGGLQNIDRTLYESADIAGTSYWTQLRAITIPMLSPTLFFVGIISLINAFQTFGQI
DLLTKGGPTNATNVIVYAIYKDAFINYNVGSASAQAVLLFIAVLLLTWLQFKLVERKVHYQ
>Mature_300_residues
TVALPREKVRTRLSDAASGLLYLSPSIILFGVFLVYPLLRTIYLSFFRTDTQGTPLEFVGVGHYSTLFTSAAFWQSIQAT
VGFVLLTVPLTILIALGLALLANEKLKGIGIFRTAFSATMGMSVAASSVIWMFMYNPSIGIFNRFLEAVGASGVQWLLDP
QYALLSVSLATVWMNIGFTFLILLGGLQNIDRTLYESADIAGTSYWTQLRAITIPMLSPTLFFVGIISLINAFQTFGQID
LLTKGGPTNATNVIVYAIYKDAFINYNVGSASAQAVLLFIAVLLLTWLQFKLVERKVHYQ

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=281, Percent_Identity=31.6725978647687, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1787570, Length=261, Percent_Identity=29.5019157088123, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=27.5590551181102, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33103; Mature: 32972

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVALPREKVRTRLSDAASGLLYLSPSIILFGVFLVYPLLRTIYLSFFRTDTQGTPLEFV
CCCCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GVGHYSTLFTSAAFWQSIQATVGFVLLTVPLTILIALGLALLANEKLKGIGIFRTAFSAT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MGMSVAASSVIWMFMYNPSIGIFNRFLEAVGASGVQWLLDPQYALLSVSLATVWMNIGFT
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
FLILLGGLQNIDRTLYESADIAGTSYWTQLRAITIPMLSPTLFFVGIISLINAFQTFGQI
HHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCE
DLLTKGGPTNATNVIVYAIYKDAFINYNVGSASAQAVLLFIAVLLLTWLQFKLVERKVHY
EEEECCCCCCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure 
TVALPREKVRTRLSDAASGLLYLSPSIILFGVFLVYPLLRTIYLSFFRTDTQGTPLEFV
CCCCCHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GVGHYSTLFTSAAFWQSIQATVGFVLLTVPLTILIALGLALLANEKLKGIGIFRTAFSAT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MGMSVAASSVIWMFMYNPSIGIFNRFLEAVGASGVQWLLDPQYALLSVSLATVWMNIGFT
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
FLILLGGLQNIDRTLYESADIAGTSYWTQLRAITIPMLSPTLFFVGIISLINAFQTFGQI
HHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCE
DLLTKGGPTNATNVIVYAIYKDAFINYNVGSASAQAVLLFIAVLLLTWLQFKLVERKVHY
EEEECCCCCCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA