Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916955

Identifier: 229916955

GI number: 229916955

Start: 1206573

End: 1207463

Strand: Direct

Name: 229916955

Synonym: EAT1b_1229

Alternate gene names: NA

Gene position: 1206573-1207463 (Clockwise)

Preceding gene: 229916952

Following gene: 229916956

Centisome position: 40.22

GC content: 50.51

Gene sequence:

>891_bases
ATGAAAAAACGACACTTGCAACTGATTCGGCTACTCAATCGCGGACGACGTTTCACGGCGGAAGAACTGGCCCAAGAGAC
AGGCGCCTCCATTCGGACGATTCAACGGGATATGCTCTCGCTCGAAGAACTCGGTTATCCGATTTGGAGTGTTCCTGGAA
CTGGGGGCGGCTATGAAATGTTGCCGAACCGCTTATTGCCACCGCTCCACCTACGCGAACAAGAAGCCGTCGCCCTTTAT
CTCACACTCAAATGGATGGAACACATTCCTGATGTGCCGTTCGGGGACATACGAAGTACGTTGTCTGATTGGTACGTGAA
CGAGTTACCACATGACGTAGAGACGAAAATTCGGCGATTGGAGCGAAACATTCTCTGGCTCGGAAACAAACAAATTCCAA
AAGCGCCGTTCACAAAAGACATTTACCAGGCAATTGAGCGCAAAAACAAGATAGAGATGACGTATCGATCGACGAACGGA
TCACGTACGTTCCCCATCGCACCGGTCGGTATGGCACTCCTTGACTTAAAGTGGTATGTCTTCGGGCTCTCCGAACTCGG
ATTCCGTCAATATCGGATTGATCGCATCGAAGCGGTCCAAGTGCTCGAGGAATCGTTCGAGTCCGAGGATTTGGTGACCT
TGCTCAAAGAGAGTGACGAACGAATCGGTGTGACCGTTCATCTCGAACTCACCCCACTCGGTCGTCGTCTGCTTGAAGAT
GTATTACCCGATATCGATGAGTTGAATGAGTGGGATGTACCTGAAGAAGAGCTACCGTTTTTATCGAGGCAGCTGTTGAG
GGCTGGAGCGGAAGTAGAGGTGAAAGCGCCGGAGCAGTTGCGGGAGATGATGAAGGAGCATGCGGAACAATTGATACAAC
GGTATATGTAA

Upstream 100 bases:

>100_bases
CAATATATAACACAACATTCGGCATCATGTGTTCCTCCTTGATTCGTGATACATTCAGCTTAACGAACAAACACGACAAA
AGATGACGGGAATGGTAGAT

Downstream 100 bases:

>100_bases
GTTTCCGAGTAAGTGCCACGAAACATTTATGAATTTTCATCCGTATAAACTACCAACACTCAACAAAGGCGGTATGTGTA
TGCATCACGAGTACAAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator; DeoR-Family Protein Transcriptional Regulator; DNA-Bind Protein; Transcriptional Regulator DeoR Family; Deor Family Transcritional Regulator

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY
LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG
SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED
VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM

Sequences:

>Translated_296_residues
MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY
LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG
SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED
VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM
>Mature_296_residues
MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY
LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG
SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED
VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34601; Mature: 34601

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEM
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
LPNRLLPPLHLREQEAVALYLTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRL
HHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNGSRTFPIAPVGMALLDLKWYV
HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHH
FGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED
HHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH
VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM
HCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEM
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
LPNRLLPPLHLREQEAVALYLTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRL
HHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNGSRTFPIAPVGMALLDLKWYV
HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHH
FGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED
HHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH
VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM
HCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA