| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916936
Identifier: 229916936
GI number: 229916936
Start: 1183739
End: 1185199
Strand: Reverse
Name: 229916936
Synonym: EAT1b_1210
Alternate gene names: NA
Gene position: 1185199-1183739 (Counterclockwise)
Preceding gene: 229916937
Following gene: 229916935
Centisome position: 39.51
GC content: 50.79
Gene sequence:
>1461_bases ATGGCGGGCATCGGGTTTAAGTTACAACAGTTGTTTCAAGAAGACTACTTCTCCTCGCGGATCAAAGCGTACGCATTTGC CGGTCTCGTCACATCCGGACCATGGCTGATCGTCATCGTCACGATTGCCCTCATGCAGTGGCTGACGAGCTATCTGTCCA TCGCCACACTCGAGGAGCGCACGACGTTCAATTTGATCGTCTCTTACAGTTTTATTTTTTCACAAGTCGTTCTCGGCGTG CAGCAACTCGTCGTCACAAGATACTTGGCGGATTGTTTTTATGAGAAACGATATGAAGACATCTTCCCGGCATTCATCGG GATGATGAAGACGACGGTCGCCATCGCGTCGTTGTTGTTCGCCATCTTCCTTACGTTCTCTGAACTTCCAGCTTTATTGA ACGCGTTGGCATTCGTCCTATTTATGACGGTCAACCTCATTTGGGTACACTTCTTGTTCCTCAGTGCGGCCAAATTTTAT CAGGCGGTCGCTTATAGTTTTGTGGCCGGTGGCATCGTCTCGGTCGCCGCGGTCATCATCACGGATCAATTCTTGATGCA ATATTTGACGGAGTCTTATATGAAAAGTTTCGCGTTGACGGCGAGTATGACACTCGGTCTCGTCGTGACGTTGTTCGGCT TGTTCACATCGATGCTCCTTACGTTCCCGAACCGGAGTACGGTCGGTCAATTCTCGTTCTACCGTTATTTTGACCGCTAT CCGGCACTCTTTTGGACCAGTTTCCTCTATAACATCGGCATCTGGGTCGGCACATGGATCATCTGGTTCGCCGAAGGAGG AAGTGTCCATCTCGACACGTTCCGCTATCATCCGATCTATGACACAGCCATCTTCCTCTCTTATTTGACGATCATTCCGA CGATGACGATTTTCGTTGTCTCCGTCGAGACGCGTTTCTATGAGCGGTATCGCGTGTTTTATGGATACGTGAACGAGGGT GGGACGTATCAACAGATTCAACGGTCAAAGGCAGCGATGCTCCTCGTCTTGCGACAAGAGCTGCAACGACTGTTCCGAAA TCAAGGGCTCGTGTCACTCCTCTTTATCCTGTTCGCGGCCGTTTTGTTCCCGCTCCTCGGTCTGTCGCCTGAGATTCGGG ACGTCTTTCAAATGACGACGATCGGTGCTTTTTCAAACGCCATGGTGCTCGTCCTCACGCTCGTATTGCTTTACTTCGAG GATCATCGGGGGGCGGCCTATACATCGGCCCTCTTCATCACAATGAATGCCGGGTTGACGTTCTTCTTGTTACCGCTCGG TTCTGACAGTTACGGTCTTAGTTTTGCGATTGGCTGCACCATTGCGTTCGCCTTCTCGCTCATTCGCTTGATTCGATACG TGTCCGAAATTGATTATCATACGTTTAGCCGAAACGAAACGCCTCCGCGGACGGATACGTTCCGTCGTGTCGGGGACTGG CTCAATGACCGCTCGGCTTAA
Upstream 100 bases:
>100_bases CGACTCGGACGAAACGGGCAACAGCGAGTCGAGACGTATTATCGCACCGACCAGTTCATCGATGCATATCTACACTTATA TGAAGAGAGGAGAGCGGTAT
Downstream 100 bases:
>100_bases CAATCGCTGCAGATGGACTTTTAGAAAATGGGGTGAAGCACATGAAAACAATTTTTGTGACAGGTGGCGCGGGGTACATC GGGACACACACGACCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MAGIGFKLQQLFQEDYFSSRIKAYAFAGLVTSGPWLIVIVTIALMQWLTSYLSIATLEERTTFNLIVSYSFIFSQVVLGV QQLVVTRYLADCFYEKRYEDIFPAFIGMMKTTVAIASLLFAIFLTFSELPALLNALAFVLFMTVNLIWVHFLFLSAAKFY QAVAYSFVAGGIVSVAAVIITDQFLMQYLTESYMKSFALTASMTLGLVVTLFGLFTSMLLTFPNRSTVGQFSFYRYFDRY PALFWTSFLYNIGIWVGTWIIWFAEGGSVHLDTFRYHPIYDTAIFLSYLTIIPTMTIFVVSVETRFYERYRVFYGYVNEG GTYQQIQRSKAAMLLVLRQELQRLFRNQGLVSLLFILFAAVLFPLLGLSPEIRDVFQMTTIGAFSNAMVLVLTLVLLYFE DHRGAAYTSALFITMNAGLTFFLLPLGSDSYGLSFAIGCTIAFAFSLIRLIRYVSEIDYHTFSRNETPPRTDTFRRVGDW LNDRSA
Sequences:
>Translated_486_residues MAGIGFKLQQLFQEDYFSSRIKAYAFAGLVTSGPWLIVIVTIALMQWLTSYLSIATLEERTTFNLIVSYSFIFSQVVLGV QQLVVTRYLADCFYEKRYEDIFPAFIGMMKTTVAIASLLFAIFLTFSELPALLNALAFVLFMTVNLIWVHFLFLSAAKFY QAVAYSFVAGGIVSVAAVIITDQFLMQYLTESYMKSFALTASMTLGLVVTLFGLFTSMLLTFPNRSTVGQFSFYRYFDRY PALFWTSFLYNIGIWVGTWIIWFAEGGSVHLDTFRYHPIYDTAIFLSYLTIIPTMTIFVVSVETRFYERYRVFYGYVNEG GTYQQIQRSKAAMLLVLRQELQRLFRNQGLVSLLFILFAAVLFPLLGLSPEIRDVFQMTTIGAFSNAMVLVLTLVLLYFE DHRGAAYTSALFITMNAGLTFFLLPLGSDSYGLSFAIGCTIAFAFSLIRLIRYVSEIDYHTFSRNETPPRTDTFRRVGDW LNDRSA >Mature_485_residues AGIGFKLQQLFQEDYFSSRIKAYAFAGLVTSGPWLIVIVTIALMQWLTSYLSIATLEERTTFNLIVSYSFIFSQVVLGVQ QLVVTRYLADCFYEKRYEDIFPAFIGMMKTTVAIASLLFAIFLTFSELPALLNALAFVLFMTVNLIWVHFLFLSAAKFYQ AVAYSFVAGGIVSVAAVIITDQFLMQYLTESYMKSFALTASMTLGLVVTLFGLFTSMLLTFPNRSTVGQFSFYRYFDRYP ALFWTSFLYNIGIWVGTWIIWFAEGGSVHLDTFRYHPIYDTAIFLSYLTIIPTMTIFVVSVETRFYERYRVFYGYVNEGG TYQQIQRSKAAMLLVLRQELQRLFRNQGLVSLLFILFAAVLFPLLGLSPEIRDVFQMTTIGAFSNAMVLVLTLVLLYFED HRGAAYTSALFITMNAGLTFFLLPLGSDSYGLSFAIGCTIAFAFSLIRLIRYVSEIDYHTFSRNETPPRTDTFRRVGDWL NDRSA
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55460; Mature: 55328
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFKLQQLFQEDYFSSRIKAYAFAGLVTSGPWLIVIVTIALMQWLTSYLSIATLEER CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TTFNLIVSYSFIFSQVVLGVQQLVVTRYLADCFYEKRYEDIFPAFIGMMKTTVAIASLLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFLTFSELPALLNALAFVLFMTVNLIWVHFLFLSAAKFYQAVAYSFVAGGIVSVAAVII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDQFLMQYLTESYMKSFALTASMTLGLVVTLFGLFTSMLLTFPNRSTVGQFSFYRYFDRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH PALFWTSFLYNIGIWVGTWIIWFAEGGSVHLDTFRYHPIYDTAIFLSYLTIIPTMTIFVV HHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHH SVETRFYERYRVFYGYVNEGGTYQQIQRSKAAMLLVLRQELQRLFRNQGLVSLLFILFAA HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLFPLLGLSPEIRDVFQMTTIGAFSNAMVLVLTLVLLYFEDHRGAAYTSALFITMNAGLT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCE FFLLPLGSDSYGLSFAIGCTIAFAFSLIRLIRYVSEIDYHTFSRNETPPRTDTFRRVGDW EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHH LNDRSA HCCCCC >Mature Secondary Structure AGIGFKLQQLFQEDYFSSRIKAYAFAGLVTSGPWLIVIVTIALMQWLTSYLSIATLEER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TTFNLIVSYSFIFSQVVLGVQQLVVTRYLADCFYEKRYEDIFPAFIGMMKTTVAIASLLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFLTFSELPALLNALAFVLFMTVNLIWVHFLFLSAAKFYQAVAYSFVAGGIVSVAAVII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDQFLMQYLTESYMKSFALTASMTLGLVVTLFGLFTSMLLTFPNRSTVGQFSFYRYFDRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH PALFWTSFLYNIGIWVGTWIIWFAEGGSVHLDTFRYHPIYDTAIFLSYLTIIPTMTIFVV HHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHH SVETRFYERYRVFYGYVNEGGTYQQIQRSKAAMLLVLRQELQRLFRNQGLVSLLFILFAA HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLFPLLGLSPEIRDVFQMTTIGAFSNAMVLVLTLVLLYFEDHRGAAYTSALFITMNAGLT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCE FFLLPLGSDSYGLSFAIGCTIAFAFSLIRLIRYVSEIDYHTFSRNETPPRTDTFRRVGDW EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHH LNDRSA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA