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The map label for this gene is wcaC [H]

Identifier: 229916924

GI number: 229916924

Start: 1168843

End: 1170057

Strand: Reverse

Name: wcaC [H]

Synonym: EAT1b_1197

Alternate gene names: 229916924

Gene position: 1170057-1168843 (Counterclockwise)

Preceding gene: 229916927

Following gene: 229916923

Centisome position: 39.0

GC content: 56.3

Gene sequence:

>1215_bases
ATGAATATTCTTCACATCAATGCCATCAACGAAGTGAAAAGCACCGGTCGGATGTGTAAAGAGCTCGCATCCGTTCATGC
CTCTTATGGACACCACGTCCGAATCGCCCATGCGACCGGGCCAGTGACCGAGACGAGTGTGGTGGTTGGACAGGCGTGGG
AAACGAAGCGACATGCGCTCCACGCCCGCGTGACGGGGCGTCAAGGATATATGTCCAAACGATCGACCGCTGACTTGATC
GCTTTCATGGACGGCTTTCGGCCGGACGTAGTTCACCTTCATAATCTTCACGCCAATTACCTTCATCTTCAGACGCTGTT
TGAGTATTTGGCGAAGCGGGACATCGCCACCGTCATGACGCTTCACGACTGCTGGCTATTCACCGGGAAATGTACGCACT
ACACGGCGGTCGGGTGTGAGCGCTGGAAGGACGGATGTGGACAGTGCCCGCTCTTAAAAAAAGACATCCCGAGCTGGTTT
TTAGACCGGACCGGAGAGATGTTGGCGGACAAGCGACAATGGTTCGATGCCATCCCTCGCTTGGCAGTAGTCGGAGTGTC
GGATTGGATCACGATGGAAGCCCACTTCTCGATTTTGCAACATGCGTCCATCATTCGTCGTATCCACAACTGGGTCGATT
TGGAGACGTTCACGCCGAAAGAGCCAGGCCCACTTCGGGCACGCCTCGGGTTGACGGGACAACACATTCTTCTCGGGGTG
GCGAGCCATTGGACCGAGGCGAAAGGACTGTCTGCCTTCATGGAGTTGGCCAAAGCCAGACCGTCCGACCAAATCGTCTT
AGTCGGACAGCTGCCAGAACAACATGACCTGCCGGCGAACGTGCTTCACATTCAAGAGACGCATGACCCGAGCGAATTGG
CTTCGTACTATGCCGCGGCAGACGTCTTGTTGAACCTGTCAGAGGAAGAGTCATTTGGAAACGTGACGGCAGAGGCGCTC
GCATGCGGCACGCCAGTCCTCGTCCTCGATTCCACGGCCAGTCCGGAACTCGTGACCGAACGGACCGGCGTCGTCGTCGC
CACACGATCGGTCAACGATGTGATGGACGGACTCGATCGTCTCCATCACGCCTCGATCTCACGAATCGCTTGTGCGAACG
AAGCGCGTCAACGGTTCGACTTGTTCGACCGGGCACAGGATTACCTGCACGTGTACGAGGAGCTGCAAACCGAGAAAGTG
AGGAACGCCTTATGA

Upstream 100 bases:

>100_bases
CAACTTGAACGGACCGGGTCACAACTTCTCGGACTCGTCCTCAACAAGCGTTCTTCTCGTGATACGAACACCTACTACGC
ATACGAGTGAGGTGTCAGAC

Downstream 100 bases:

>100_bases
CACCACTCGTATCCATCATCATCCCAGTCTATAACGGGAGTGATTATTTACGGACTTGTATCGACAGCGCCTTGGCCCAG
ACGTATCCAGCGATTGAAGT

Product: glycosyl transferase group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNILHINAINEVKSTGRMCKELASVHASYGHHVRIAHATGPVTETSVVVGQAWETKRHALHARVTGRQGYMSKRSTADLI
AFMDGFRPDVVHLHNLHANYLHLQTLFEYLAKRDIATVMTLHDCWLFTGKCTHYTAVGCERWKDGCGQCPLLKKDIPSWF
LDRTGEMLADKRQWFDAIPRLAVVGVSDWITMEAHFSILQHASIIRRIHNWVDLETFTPKEPGPLRARLGLTGQHILLGV
ASHWTEAKGLSAFMELAKARPSDQIVLVGQLPEQHDLPANVLHIQETHDPSELASYYAAADVLLNLSEEESFGNVTAEAL
ACGTPVLVLDSTASPELVTERTGVVVATRSVNDVMDGLDRLHHASISRIACANEARQRFDLFDRAQDYLHVYEELQTEKV
RNAL

Sequences:

>Translated_404_residues
MNILHINAINEVKSTGRMCKELASVHASYGHHVRIAHATGPVTETSVVVGQAWETKRHALHARVTGRQGYMSKRSTADLI
AFMDGFRPDVVHLHNLHANYLHLQTLFEYLAKRDIATVMTLHDCWLFTGKCTHYTAVGCERWKDGCGQCPLLKKDIPSWF
LDRTGEMLADKRQWFDAIPRLAVVGVSDWITMEAHFSILQHASIIRRIHNWVDLETFTPKEPGPLRARLGLTGQHILLGV
ASHWTEAKGLSAFMELAKARPSDQIVLVGQLPEQHDLPANVLHIQETHDPSELASYYAAADVLLNLSEEESFGNVTAEAL
ACGTPVLVLDSTASPELVTERTGVVVATRSVNDVMDGLDRLHHASISRIACANEARQRFDLFDRAQDYLHVYEELQTEKV
RNAL
>Mature_404_residues
MNILHINAINEVKSTGRMCKELASVHASYGHHVRIAHATGPVTETSVVVGQAWETKRHALHARVTGRQGYMSKRSTADLI
AFMDGFRPDVVHLHNLHANYLHLQTLFEYLAKRDIATVMTLHDCWLFTGKCTHYTAVGCERWKDGCGQCPLLKKDIPSWF
LDRTGEMLADKRQWFDAIPRLAVVGVSDWITMEAHFSILQHASIIRRIHNWVDLETFTPKEPGPLRARLGLTGQHILLGV
ASHWTEAKGLSAFMELAKARPSDQIVLVGQLPEQHDLPANVLHIQETHDPSELASYYAAADVLLNLSEEESFGNVTAEAL
ACGTPVLVLDSTASPELVTERTGVVVATRSVNDVMDGLDRLHHASISRIACANEARQRFDLFDRAQDYLHVYEELQTEKV
RNAL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788370, Length=278, Percent_Identity=27.6978417266187, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45197; Mature: 45197

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILHINAINEVKSTGRMCKELASVHASYGHHVRIAHATGPVTETSVVVGQAWETKRHAL
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHH
HARVTGRQGYMSKRSTADLIAFMDGFRPDVVHLHNLHANYLHLQTLFEYLAKRDIATVMT
EEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LHDCWLFTGKCTHYTAVGCERWKDGCGQCPLLKKDIPSWFLDRTGEMLADKRQWFDAIPR
HHHHHEEECCCCEEEHHCHHHHHCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHCCC
LAVVGVSDWITMEAHFSILQHASIIRRIHNWVDLETFTPKEPGPLRARLGLTGQHILLGV
EEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHH
ASHWTEAKGLSAFMELAKARPSDQIVLVGQLPEQHDLPANVLHIQETHDPSELASYYAAA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
DVLLNLSEEESFGNVTAEALACGTPVLVLDSTASPELVTERTGVVVATRSVNDVMDGLDR
HHHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEECCCCEEEEECCHHHHHHHHHH
LHHASISRIACANEARQRFDLFDRAQDYLHVYEELQTEKVRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILHINAINEVKSTGRMCKELASVHASYGHHVRIAHATGPVTETSVVVGQAWETKRHAL
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHH
HARVTGRQGYMSKRSTADLIAFMDGFRPDVVHLHNLHANYLHLQTLFEYLAKRDIATVMT
EEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LHDCWLFTGKCTHYTAVGCERWKDGCGQCPLLKKDIPSWFLDRTGEMLADKRQWFDAIPR
HHHHHEEECCCCEEEHHCHHHHHCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHCCC
LAVVGVSDWITMEAHFSILQHASIIRRIHNWVDLETFTPKEPGPLRARLGLTGQHILLGV
EEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHH
ASHWTEAKGLSAFMELAKARPSDQIVLVGQLPEQHDLPANVLHIQETHDPSELASYYAAA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
DVLLNLSEEESFGNVTAEALACGTPVLVLDSTASPELVTERTGVVVATRSVNDVMDGLDR
HHHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEECCCCEEEEECCHHHHHHHHHH
LHHASISRIACANEARQRFDLFDRAQDYLHVYEELQTEKVRNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]