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The map label for this gene is yibD [C]

Identifier: 229916923

GI number: 229916923

Start: 1167920

End: 1168846

Strand: Reverse

Name: yibD [C]

Synonym: EAT1b_1196

Alternate gene names: 229916923

Gene position: 1168846-1167920 (Counterclockwise)

Preceding gene: 229916924

Following gene: 229916922

Centisome position: 38.96

GC content: 52.64

Gene sequence:

>927_bases
ATGACACCACTCGTATCCATCATCATCCCAGTCTATAACGGGAGTGATTATTTACGGACTTGTATCGACAGCGCCTTGGC
CCAGACGTATCCAGCGATTGAAGTGATCGTCGTCAACGACGGCTCGACCGATGAGGGAAAGACGGCGGCGATCGCCACAA
GTTACGGCAATCAAATTCGCTACGTGGAAAAGGAGAATGGGGGCGTCTCGAGTGCGTTGAATCGTGGAATTGAAGAGATG
AGCGGAGACTACTTCTCTTGGCTCAGCCACGATGACGTGTATGCGCCGACAAAGATCGAACGACAGCTCGATGTGATGCG
CGAGCAACATCTCCCGATGAACCAGACGATCGTCGTGACAGGGACGGCGTTCATTGACGAAAAGGGGGAGGCGATTCGAC
GGGTGCAACGGAAAGTGAGCGGATTCTATTCGAGTCAGGACATGTTCCGTCACTTGTTGTTGTCGTCGACTTTGAACGGA
TGCGCGCTCTTGATTCCGCGACAAGCGTTCGAACATCGGCGTTTCTCGCTAGAGGACCGCTTCATCCAAGACTGGATCTG
CTGGGTCGAGTTGGCGCTCGACGGGTTCGACTTTTACGTCATGCGTGAGCCGCTCGTCTATTCACGGATTCACGGCGAGC
AACAGACGAAAAAAATCGCACACCGGGCCACGATGGAATCGAATCGCTATCTGAAGCGGCTACTCCAGGACGTCGAGGTC
CGTGATAACGGAGAGGAATTGACCGCTATCATTCTGAAGCACACGTTCAAGGAAAATGCGGCGGACGTACGGGAACAGTA
CTTAACGACACATGATGTGAATCGTTACTTTGGACCGATGGAATATCGGTGGCTCCGCTGGAACGGCATCTTGTTTTCAA
ATCTGCTGTCTCTATATCGGGGAATGACCAATCTGATCTATCGCTAG

Upstream 100 bases:

>100_bases
GTGCGAACGAAGCGCGTCAACGGTTCGACTTGTTCGACCGGGCACAGGATTACCTGCACGTGTACGAGGAGCTGCAAACC
GAGAAAGTGAGGAACGCCTT

Downstream 100 bases:

>100_bases
AAAGGAGGGATTGAGATGACGATCTATTTAGTCAATATGGCGCTGTTGGTCGGTTGGGGAATGTTGTTAATCCGTCACGA
GATTCCGAGTCGCCGGGCTT

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTPLVSIIIPVYNGSDYLRTCIDSALAQTYPAIEVIVVNDGSTDEGKTAAIATSYGNQIRYVEKENGGVSSALNRGIEEM
SGDYFSWLSHDDVYAPTKIERQLDVMREQHLPMNQTIVVTGTAFIDEKGEAIRRVQRKVSGFYSSQDMFRHLLLSSTLNG
CALLIPRQAFEHRRFSLEDRFIQDWICWVELALDGFDFYVMREPLVYSRIHGEQQTKKIAHRATMESNRYLKRLLQDVEV
RDNGEELTAIILKHTFKENAADVREQYLTTHDVNRYFGPMEYRWLRWNGILFSNLLSLYRGMTNLIYR

Sequences:

>Translated_308_residues
MTPLVSIIIPVYNGSDYLRTCIDSALAQTYPAIEVIVVNDGSTDEGKTAAIATSYGNQIRYVEKENGGVSSALNRGIEEM
SGDYFSWLSHDDVYAPTKIERQLDVMREQHLPMNQTIVVTGTAFIDEKGEAIRRVQRKVSGFYSSQDMFRHLLLSSTLNG
CALLIPRQAFEHRRFSLEDRFIQDWICWVELALDGFDFYVMREPLVYSRIHGEQQTKKIAHRATMESNRYLKRLLQDVEV
RDNGEELTAIILKHTFKENAADVREQYLTTHDVNRYFGPMEYRWLRWNGILFSNLLSLYRGMTNLIYR
>Mature_307_residues
TPLVSIIIPVYNGSDYLRTCIDSALAQTYPAIEVIVVNDGSTDEGKTAAIATSYGNQIRYVEKENGGVSSALNRGIEEMS
GDYFSWLSHDDVYAPTKIERQLDVMREQHLPMNQTIVVTGTAFIDEKGEAIRRVQRKVSGFYSSQDMFRHLLLSSTLNGC
ALLIPRQAFEHRRFSLEDRFIQDWICWVELALDGFDFYVMREPLVYSRIHGEQQTKKIAHRATMESNRYLKRLLQDVEVR
DNGEELTAIILKHTFKENAADVREQYLTTHDVNRYFGPMEYRWLRWNGILFSNLLSLYRGMTNLIYR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=117, Percent_Identity=39.3162393162393, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 35674; Mature: 35543

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLVSIIIPVYNGSDYLRTCIDSALAQTYPAIEVIVVNDGSTDEGKTAAIATSYGNQIR
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEE
YVEKENGGVSSALNRGIEEMSGDYFSWLSHDDVYAPTKIERQLDVMREQHLPMNQTIVVT
EEECCCCCHHHHHHHCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GTAFIDEKGEAIRRVQRKVSGFYSSQDMFRHLLLSSTLNGCALLIPRQAFEHRRFSLEDR
EEHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCHHHH
FIQDWICWVELALDGFDFYVMREPLVYSRIHGEQQTKKIAHRATMESNRYLKRLLQDVEV
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDNGEELTAIILKHTFKENAADVREQYLTTHDVNRYFGPMEYRWLRWNGILFSNLLSLYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
GMTNLIYR
HHHHHHCC
>Mature Secondary Structure 
TPLVSIIIPVYNGSDYLRTCIDSALAQTYPAIEVIVVNDGSTDEGKTAAIATSYGNQIR
CCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEE
YVEKENGGVSSALNRGIEEMSGDYFSWLSHDDVYAPTKIERQLDVMREQHLPMNQTIVVT
EEECCCCCHHHHHHHCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GTAFIDEKGEAIRRVQRKVSGFYSSQDMFRHLLLSSTLNGCALLIPRQAFEHRRFSLEDR
EEHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCHHHH
FIQDWICWVELALDGFDFYVMREPLVYSRIHGEQQTKKIAHRATMESNRYLKRLLQDVEV
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDNGEELTAIILKHTFKENAADVREQYLTTHDVNRYFGPMEYRWLRWNGILFSNLLSLYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
GMTNLIYR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]