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The map label for this gene is yclN [H]

Identifier: 229916848

GI number: 229916848

Start: 1098372

End: 1099376

Strand: Reverse

Name: yclN [H]

Synonym: EAT1b_1121

Alternate gene names: 229916848

Gene position: 1099376-1098372 (Counterclockwise)

Preceding gene: 229916849

Following gene: 229916847

Centisome position: 36.65

GC content: 56.62

Gene sequence:

>1005_bases
ATGCAAAAACCATTGACAGCCAGGGTTGAGACGATGTCTCAGCCCTCCTTTTCTAGATTGTGTACGAAGTCGTTCGTGTT
CACCGTGATCATCGTCCTCGGTTTGGCGGTGCTGTCGCTTTTTACCGGGGTGTACGATCTGTCACGGACAGACGGCTTCG
ATATGTTTTGGATCACCCGTGTCCCACGGACGGTCGCCCTCATGCTGACGGGTGCGGCGATGGCGATGGCGGGGCTCGTC
ATGCAGCTCATCACGCAAAACCGACTCGTCGAACCGACGACGACGGGGACGCTCGAATGGGCGGGACTCGGACTGCTCAC
CGTTTATTTACTCGTACCGGCACCGAGCCTCATGATGCGTATGACCGGGGCAATCGTCTTCTCGTTTATCGGGACGATGG
TCTTCTTCTGGTTCTTGCGTTCGGTCAAACTTCGTTCATCGCTCATCGTGCCGATCATCGGGCTCATGTTAGGGGCGGTC
ATCTCCGCTATCTCGACGTTCCTCGGTCTATTCTTCCGGGCAAGCCAGGCGATCGAGGGCTGGTTCGTCGGTTCGTTCGC
CTCGGTGCAAATCGGGCGCTACGAGTATCTATGGGTCATCATCGTCGTGACGGTACTCATCTTCTTACTGGCGAATCGCT
TGACGCTCGCGGGATTAGGGGAAGACATCGCGACGAGTCTCGGCGTGAACTATAACCAGCTCATGATGATGGCGACGGGG
CTCATCGCCTTATCGGTCGGTGTCGTGGCGACGGTCATCGGGAATTTGCCGTTCCTTGGACTCATCGTCCCGAACCTCGT
CTCGATGTTCCGTGGGGATGATTTGCGCAGCAACCTGCCATGGGTCTGTCTAGTCGGGATGGGTGCGATTCTCGTCAGTG
ACTTGATCTCACGGACGATCATCATGCCGTTCGAACTCCCGGTCTCCTTGATTCTCGGGACGGTCGGGGCAGTCGTCTTC
ATCATGATCTTGATGCGACAACGGAAGAAAGGAGGGGTTCGATGA

Upstream 100 bases:

>100_bases
CGTCTATGCCCCGAAAGACACGTACTTGAACGAATCGATTCAAACGTACGCGGAATTCTTCAACAGTGTCACGGAAGCGC
TCGCGAAGTAAGGTTCCGTC

Downstream 100 bases:

>100_bases
GTACGGTCATAGAACGAGACGGCGTCGAAGTCTCGATTGGGGAATTGAGAGAAGAACGTCACGCCTCGGCGTTTCAATCG
AAACGGGCGAGCAGGCGCTA

Product: transport system permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQKPLTARVETMSQPSFSRLCTKSFVFTVIIVLGLAVLSLFTGVYDLSRTDGFDMFWITRVPRTVALMLTGAAMAMAGLV
MQLITQNRLVEPTTTGTLEWAGLGLLTVYLLVPAPSLMMRMTGAIVFSFIGTMVFFWFLRSVKLRSSLIVPIIGLMLGAV
ISAISTFLGLFFRASQAIEGWFVGSFASVQIGRYEYLWVIIVVTVLIFLLANRLTLAGLGEDIATSLGVNYNQLMMMATG
LIALSVGVVATVIGNLPFLGLIVPNLVSMFRGDDLRSNLPWVCLVGMGAILVSDLISRTIIMPFELPVSLILGTVGAVVF
IMILMRQRKKGGVR

Sequences:

>Translated_334_residues
MQKPLTARVETMSQPSFSRLCTKSFVFTVIIVLGLAVLSLFTGVYDLSRTDGFDMFWITRVPRTVALMLTGAAMAMAGLV
MQLITQNRLVEPTTTGTLEWAGLGLLTVYLLVPAPSLMMRMTGAIVFSFIGTMVFFWFLRSVKLRSSLIVPIIGLMLGAV
ISAISTFLGLFFRASQAIEGWFVGSFASVQIGRYEYLWVIIVVTVLIFLLANRLTLAGLGEDIATSLGVNYNQLMMMATG
LIALSVGVVATVIGNLPFLGLIVPNLVSMFRGDDLRSNLPWVCLVGMGAILVSDLISRTIIMPFELPVSLILGTVGAVVF
IMILMRQRKKGGVR
>Mature_334_residues
MQKPLTARVETMSQPSFSRLCTKSFVFTVIIVLGLAVLSLFTGVYDLSRTDGFDMFWITRVPRTVALMLTGAAMAMAGLV
MQLITQNRLVEPTTTGTLEWAGLGLLTVYLLVPAPSLMMRMTGAIVFSFIGTMVFFWFLRSVKLRSSLIVPIIGLMLGAV
ISAISTFLGLFFRASQAIEGWFVGSFASVQIGRYEYLWVIIVVTVLIFLLANRLTLAGLGEDIATSLGVNYNQLMMMATG
LIALSVGVVATVIGNLPFLGLIVPNLVSMFRGDDLRSNLPWVCLVGMGAILVSDLISRTIIMPFELPVSLILGTVGAVVF
IMILMRQRKKGGVR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=281, Percent_Identity=30.9608540925267, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=27.5, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1790740, Length=325, Percent_Identity=28.3076923076923, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786805, Length=286, Percent_Identity=30.0699300699301, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786347, Length=292, Percent_Identity=24.6575342465753, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36381; Mature: 36381

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPLTARVETMSQPSFSRLCTKSFVFTVIIVLGLAVLSLFTGVYDLSRTDGFDMFWITR
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
VPRTVALMLTGAAMAMAGLVMQLITQNRLVEPTTTGTLEWAGLGLLTVYLLVPAPSLMMR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
MTGAIVFSFIGTMVFFWFLRSVKLRSSLIVPIIGLMLGAVISAISTFLGLFFRASQAIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVGSFASVQIGRYEYLWVIIVVTVLIFLLANRLTLAGLGEDIATSLGVNYNQLMMMATG
HEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
LIALSVGVVATVIGNLPFLGLIVPNLVSMFRGDDLRSNLPWVCLVGMGAILVSDLISRTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
IMPFELPVSLILGTVGAVVFIMILMRQRKKGGVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKPLTARVETMSQPSFSRLCTKSFVFTVIIVLGLAVLSLFTGVYDLSRTDGFDMFWITR
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
VPRTVALMLTGAAMAMAGLVMQLITQNRLVEPTTTGTLEWAGLGLLTVYLLVPAPSLMMR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
MTGAIVFSFIGTMVFFWFLRSVKLRSSLIVPIIGLMLGAVISAISTFLGLFFRASQAIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVGSFASVQIGRYEYLWVIIVVTVLIFLLANRLTLAGLGEDIATSLGVNYNQLMMMATG
HEECCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
LIALSVGVVATVIGNLPFLGLIVPNLVSMFRGDDLRSNLPWVCLVGMGAILVSDLISRTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
IMPFELPVSLILGTVGAVVFIMILMRQRKKGGVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]