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The map label for this gene is yclQ [H]

Identifier: 229916849

GI number: 229916849

Start: 1099386

End: 1100387

Strand: Reverse

Name: yclQ [H]

Synonym: EAT1b_1122

Alternate gene names: 229916849

Gene position: 1100387-1099386 (Counterclockwise)

Preceding gene: 229916850

Following gene: 229916848

Centisome position: 36.68

GC content: 53.19

Gene sequence:

>1002_bases
GTGGGGAAATTCAAGATTTCACTCATGTTGACGTTGCTCGTCTTCGTACTCGCCGCATGTGGCGGAACGAGTGAGACGAA
GAAAGAAGAAAACGTCGACGGCGCAACAAAGACAGAGACGGTCGAAATTACAGACGCACACGGCACAATCGAGGTACCGG
TCAACCCGGAGAAGGTCGTCGCCCTTGATAACCGGACGTTTGAAACATTGGCAGCATGGGACATCGACTTGGTGGCGGCA
CCAATCGGACTCCTTCCAGCAGAGTCGCCATATGCATCAGATAAAGACATCGCAGACGTCGGCATGCACTTCGAGCCGAA
CTTAGAGGCGATTGCAGGAGTTGACCCGGACGTCGTCATCGTCGGTCAACGTTTCGCGGATTACTACGAGGACATCAAAA
AGTTGGTACCGGAAGCAGCGGTCATCGATTTGAACATCGAGATCCCAGAAGATTCAGGCACACCGGGTGAGATTTTAGTC
AAAGGATTGACAGACACGACACTCACACTCGGAAAAATCTTTGACAAAAACACAGAAGCCGAAGCCATCGTCGCTGACCT
CGACAAGTCGATTGAAGACGCGAAAGCGGCATACAACGGAAAAGACACAATCATGTCGGTCATCGTATCGGGCGGAGACA
TCGGGTTCTCAGCACCGGTAACGGGACGCGTGTTCGGACCGATGTACGACATCTTCGGATGGGTCCCAGCCCTTGAAGTC
GAGAAGACGACAGGTGACCATGAAGGTGACGAAGTATCCGTCGAAGCCATCGCGGAAAGCAACCCAGACTGGTTGTTCGT
TCTCGACCGTGACGCACCACTCGGTGACGCAGAAGGCGCAGTACCAGCCGAAGACGTGATCGACAACGCGCCGGCGCTTC
AAAAGACGACGGCTGTGACGAAAGAGCAAATCGTCTATGCCCCGAAAGACACGTACTTGAACGAATCGATTCAAACGTAC
GCGGAATTCTTCAACAGTGTCACGGAAGCGCTCGCGAAGTAA

Upstream 100 bases:

>100_bases
ATCACTGATAACGAGAACGCGAGAATAGACATACATAACCAACGTGGCTCGTTTTTGGTGGGAGGATCATTGAAACTTAC
ATACAGAGGAGATGGATGAA

Downstream 100 bases:

>100_bases
GGTTCCGTCATGCAAAAACCATTGACAGCCAGGGTTGAGACGATGTCTCAGCCCTCCTTTTCTAGATTGTGTACGAAGTC
GTTCGTGTTCACCGTGATCA

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MGKFKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVVALDNRTFETLAAWDIDLVAA
PIGLLPAESPYASDKDIADVGMHFEPNLEAIAGVDPDVVIVGQRFADYYEDIKKLVPEAAVIDLNIEIPEDSGTPGEILV
KGLTDTTLTLGKIFDKNTEAEAIVADLDKSIEDAKAAYNGKDTIMSVIVSGGDIGFSAPVTGRVFGPMYDIFGWVPALEV
EKTTGDHEGDEVSVEAIAESNPDWLFVLDRDAPLGDAEGAVPAEDVIDNAPALQKTTAVTKEQIVYAPKDTYLNESIQTY
AEFFNSVTEALAK

Sequences:

>Translated_333_residues
MGKFKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVVALDNRTFETLAAWDIDLVAA
PIGLLPAESPYASDKDIADVGMHFEPNLEAIAGVDPDVVIVGQRFADYYEDIKKLVPEAAVIDLNIEIPEDSGTPGEILV
KGLTDTTLTLGKIFDKNTEAEAIVADLDKSIEDAKAAYNGKDTIMSVIVSGGDIGFSAPVTGRVFGPMYDIFGWVPALEV
EKTTGDHEGDEVSVEAIAESNPDWLFVLDRDAPLGDAEGAVPAEDVIDNAPALQKTTAVTKEQIVYAPKDTYLNESIQTY
AEFFNSVTEALAK
>Mature_332_residues
GKFKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVVALDNRTFETLAAWDIDLVAAP
IGLLPAESPYASDKDIADVGMHFEPNLEAIAGVDPDVVIVGQRFADYYEDIKKLVPEAAVIDLNIEIPEDSGTPGEILVK
GLTDTTLTLGKIFDKNTEAEAIVADLDKSIEDAKAAYNGKDTIMSVIVSGGDIGFSAPVTGRVFGPMYDIFGWVPALEVE
KTTGDHEGDEVSVEAIAESNPDWLFVLDRDAPLGDAEGAVPAEDVIDNAPALQKTTAVTKEQIVYAPKDTYLNESIQTYA
EFFNSVTEALAK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35641; Mature: 35510

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEE
ALDNRTFETLAAWDIDLVAAPIGLLPAESPYASDKDIADVGMHFEPNLEAIAGVDPDVVI
EECCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCEEE
VGQRFADYYEDIKKLVPEAAVIDLNIEIPEDSGTPGEILVKGLTDTTLTLGKIFDKNTEA
ECHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHCCCCCH
EAIVADLDKSIEDAKAAYNGKDTIMSVIVSGGDIGFSAPVTGRVFGPMYDIFGWVPALEV
HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
EKTTGDHEGDEVSVEAIAESNPDWLFVLDRDAPLGDAEGAVPAEDVIDNAPALQKTTAVT
ECCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH
KEQIVYAPKDTYLNESIQTYAEFFNSVTEALAK
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKFKISLMLTLLVFVLAACGGTSETKKEENVDGATKTETVEITDAHGTIEVPVNPEKVV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEE
ALDNRTFETLAAWDIDLVAAPIGLLPAESPYASDKDIADVGMHFEPNLEAIAGVDPDVVI
EECCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCEEE
VGQRFADYYEDIKKLVPEAAVIDLNIEIPEDSGTPGEILVKGLTDTTLTLGKIFDKNTEA
ECHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHEEEECCCCHHHHHHHHHCCCCCH
EAIVADLDKSIEDAKAAYNGKDTIMSVIVSGGDIGFSAPVTGRVFGPMYDIFGWVPALEV
HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
EKTTGDHEGDEVSVEAIAESNPDWLFVLDRDAPLGDAEGAVPAEDVIDNAPALQKTTAVT
ECCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH
KEQIVYAPKDTYLNESIQTYAEFFNSVTEALAK
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]