| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is yclO [H]
Identifier: 229916847
GI number: 229916847
Start: 1097317
End: 1098375
Strand: Reverse
Name: yclO [H]
Synonym: EAT1b_1120
Alternate gene names: 229916847
Gene position: 1098375-1097317 (Counterclockwise)
Preceding gene: 229916848
Following gene: 229916846
Centisome position: 36.61
GC content: 55.71
Gene sequence:
>1059_bases ATGAGTACGGTCATAGAACGAGACGGCGTCGAAGTCTCGATTGGGGAATTGAGAGAAGAACGTCACGCCTCGGCGTTTCA ATCGAAACGGGCGAGCAGGCGCTATTGGGTCTTCTTAAGTGCCTTCATTCTCGGCGGACTGTTGTGTGCGCTCGGGCTTC TCCTTTATAACAATCCGGTCCCGATGGACTCTCCGTCATTCGTGCCGGTCGTGGAACGGCGAATCGTCGCCATCGTCACG ATGTTGATTGCGGCACTCTGTCAAAGTCTTGCGACGGTCGCATTCCACTCCGTGACGAACAACCGCATCATCACGCCATC ACTCCTTGGATTCGACGCGCTGTACTCGACGATTCAGACGAGCATGGTCTTCTTCTTCGGGGCAGGGGCGTTGATCGGCT TCTCGGGGACAAGCGCCTTCTTGACACAGGTCGGCCTCATGGTGACGATGAGTCTCCTCCTTTACGGATGGCTCTTGTCA GGGAAATACGCCAACCTGCAGCTCATGCTGCTCATCGGGATCATCATCGGGACGGGTCTGAACTCGGTGTCATCGTTCAT GCGCCGTATGCTCGCCCCGTCCGAGTTCGATATCCTGCAGGCGCGGCTGTTCGGTTCGGTGACGAATGCCGACGTGGCGT ACTTTCCCATCGTCATCCCAATCGTCGTCATCGCCGGGACACTCTTGTTCCTGTTCTCGAATCGATTGAATATCGTCGCA CTCGGTAAGGACGTCGCGACGACGTTCGGGGTGAACCATCGGAGGAGTGTCATCTACACGCTCGTCCTGATCTCACTCCT CATGTCCGTCTCGACGGCGCTCATCGGACCGCTCACGTTCTTCGGATTCTTAGTCGCGACGCTCAGCTATCAGGTCGCCT CGACGTATGACCATAAGTACGTCTTTCCGATGGCGTTCGCCCTAGGGTTCTTCGTCCTGACGAGCGCATATTTCTTCATG TATCACATATTCCAGACGCCAAGTGTCGTCTCCGTCATCATCGAACTGTTCGGCGGACTCATCTTCTTGGCCGTCATTCT AAGGAAGAGGTCGCTATGA
Upstream 100 bases:
>100_bases TCATGCCGTTCGAACTCCCGGTCTCCTTGATTCTCGGGACGGTCGGGGCAGTCGTCTTCATCATGATCTTGATGCGACAA CGGAAGAAAGGAGGGGTTCG
Downstream 100 bases:
>100_bases TTCAAATCGAACAAGTCAAAAAATCGTATACAGACGATGTCCACATCGGACCACTCACGCTCGATATCCCGAAAGCCGGA TTCACTTCATTGATTGGACC
Product: transport system permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSTVIERDGVEVSIGELREERHASAFQSKRASRRYWVFLSAFILGGLLCALGLLLYNNPVPMDSPSFVPVVERRIVAIVT MLIAALCQSLATVAFHSVTNNRIITPSLLGFDALYSTIQTSMVFFFGAGALIGFSGTSAFLTQVGLMVTMSLLLYGWLLS GKYANLQLMLLIGIIIGTGLNSVSSFMRRMLAPSEFDILQARLFGSVTNADVAYFPIVIPIVVIAGTLLFLFSNRLNIVA LGKDVATTFGVNHRRSVIYTLVLISLLMSVSTALIGPLTFFGFLVATLSYQVASTYDHKYVFPMAFALGFFVLTSAYFFM YHIFQTPSVVSVIIELFGGLIFLAVILRKRSL
Sequences:
>Translated_352_residues MSTVIERDGVEVSIGELREERHASAFQSKRASRRYWVFLSAFILGGLLCALGLLLYNNPVPMDSPSFVPVVERRIVAIVT MLIAALCQSLATVAFHSVTNNRIITPSLLGFDALYSTIQTSMVFFFGAGALIGFSGTSAFLTQVGLMVTMSLLLYGWLLS GKYANLQLMLLIGIIIGTGLNSVSSFMRRMLAPSEFDILQARLFGSVTNADVAYFPIVIPIVVIAGTLLFLFSNRLNIVA LGKDVATTFGVNHRRSVIYTLVLISLLMSVSTALIGPLTFFGFLVATLSYQVASTYDHKYVFPMAFALGFFVLTSAYFFM YHIFQTPSVVSVIIELFGGLIFLAVILRKRSL >Mature_351_residues STVIERDGVEVSIGELREERHASAFQSKRASRRYWVFLSAFILGGLLCALGLLLYNNPVPMDSPSFVPVVERRIVAIVTM LIAALCQSLATVAFHSVTNNRIITPSLLGFDALYSTIQTSMVFFFGAGALIGFSGTSAFLTQVGLMVTMSLLLYGWLLSG KYANLQLMLLIGIIIGTGLNSVSSFMRRMLAPSEFDILQARLFGSVTNADVAYFPIVIPIVVIAGTLLFLFSNRLNIVAL GKDVATTFGVNHRRSVIYTLVLISLLMSVSTALIGPLTFFGFLVATLSYQVASTYDHKYVFPMAFALGFFVLTSAYFFMY HIFQTPSVVSVIIELFGGLIFLAVILRKRSL
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG4605
COG function: function code P; ABC-type enterochelin transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 38594; Mature: 38463
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIERDGVEVSIGELREERHASAFQSKRASRRYWVFLSAFILGGLLCALGLLLYNNPV CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PMDSPSFVPVVERRIVAIVTMLIAALCQSLATVAFHSVTNNRIITPSLLGFDALYSTIQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHH SMVFFFGAGALIGFSGTSAFLTQVGLMVTMSLLLYGWLLSGKYANLQLMLLIGIIIGTGL HHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCH NSVSSFMRRMLAPSEFDILQARLFGSVTNADVAYFPIVIPIVVIAGTLLFLFSNRLNIVA HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LGKDVATTFGVNHRRSVIYTLVLISLLMSVSTALIGPLTFFGFLVATLSYQVASTYDHKY ECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VFPMAFALGFFVLTSAYFFMYHIFQTPSVVSVIIELFGGLIFLAVILRKRSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STVIERDGVEVSIGELREERHASAFQSKRASRRYWVFLSAFILGGLLCALGLLLYNNPV CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PMDSPSFVPVVERRIVAIVTMLIAALCQSLATVAFHSVTNNRIITPSLLGFDALYSTIQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHH SMVFFFGAGALIGFSGTSAFLTQVGLMVTMSLLLYGWLLSGKYANLQLMLLIGIIIGTGL HHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCH NSVSSFMRRMLAPSEFDILQARLFGSVTNADVAYFPIVIPIVVIAGTLLFLFSNRLNIVA HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LGKDVATTFGVNHRRSVIYTLVLISLLMSVSTALIGPLTFFGFLVATLSYQVASTYDHKY ECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH VFPMAFALGFFVLTSAYFFMYHIFQTPSVVSVIIELFGGLIFLAVILRKRSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]