| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916836
Identifier: 229916836
GI number: 229916836
Start: 1088197
End: 1088640
Strand: Reverse
Name: 229916836
Synonym: EAT1b_1109
Alternate gene names: NA
Gene position: 1088640-1088197 (Counterclockwise)
Preceding gene: 229916837
Following gene: 229916835
Centisome position: 36.29
GC content: 49.77
Gene sequence:
>444_bases ATGAAAGACAAGCGAGATCTCATCTATTCGCTCAAACCACTGCCGGTGACCCCAATCTCCTCAAGTCGATTCCTATGGTG GATGAAAGCATTTCTTCTATTATTACTCCTCGGTTGGTGCATGACGATGCTGAACGTCGTGAGTGAGAACTCGACGGAGC GTTACATGAAAAACGAGTACGGTGTCGAGGAAATCTATTTCATGGAGGAAGAGCGCTTCTATTATGTGATCGATCGCCAG TTCAAGTTCGAGCGGTTCTCGAGCGCAACCGAAGACCATGGATACTTACGGATCGAGCAGATCGACTACACGGACCGATA CGGCAACAAGGTCGACTTTCGCTTCATCAAGGTCGCCGGGATCTTCTTTGACCGGACCGACCATGAGGCCAATTACCGCG TGCTCGAGCGAAAGAAATCAAGTGAGCGACCATTCGACGAATGA
Upstream 100 bases:
>100_bases TGCGGAGAAACGCGCATTCATCCAATCGCTTCAATACGCAGGATACTAATTCCTTAGGACCGGTGGAGACACCGGTCTTT TTGGTGAACGGAGTTGCATC
Downstream 100 bases:
>100_bases GTCGACATCTTGTCGAAACATTTTTGTTACATTTTTGAAACATAAACCGATAATTATCGTAGAACGATGTGGGGCACACG CTCCAAAACAAACGAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKDKRDLIYSLKPLPVTPISSSRFLWWMKAFLLLLLLGWCMTMLNVVSENSTERYMKNEYGVEEIYFMEEERFYYVIDRQ FKFERFSSATEDHGYLRIEQIDYTDRYGNKVDFRFIKVAGIFFDRTDHEANYRVLERKKSSERPFDE
Sequences:
>Translated_147_residues MKDKRDLIYSLKPLPVTPISSSRFLWWMKAFLLLLLLGWCMTMLNVVSENSTERYMKNEYGVEEIYFMEEERFYYVIDRQ FKFERFSSATEDHGYLRIEQIDYTDRYGNKVDFRFIKVAGIFFDRTDHEANYRVLERKKSSERPFDE >Mature_147_residues MKDKRDLIYSLKPLPVTPISSSRFLWWMKAFLLLLLLGWCMTMLNVVSENSTERYMKNEYGVEEIYFMEEERFYYVIDRQ FKFERFSSATEDHGYLRIEQIDYTDRYGNKVDFRFIKVAGIFFDRTDHEANYRVLERKKSSERPFDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17971; Mature: 17971
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKRDLIYSLKPLPVTPISSSRFLWWMKAFLLLLLLGWCMTMLNVVSENSTERYMKNEY CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GVEEIYFMEEERFYYVIDRQFKFERFSSATEDHGYLRIEQIDYTDRYGNKVDFRFIKVAG CCCEEEEEECCCEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCEECEEEEEEEE IFFDRTDHEANYRVLERKKSSERPFDE EEEECCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MKDKRDLIYSLKPLPVTPISSSRFLWWMKAFLLLLLLGWCMTMLNVVSENSTERYMKNEY CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GVEEIYFMEEERFYYVIDRQFKFERFSSATEDHGYLRIEQIDYTDRYGNKVDFRFIKVAG CCCEEEEEECCCEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCEECEEEEEEEE IFFDRTDHEANYRVLERKKSSERPFDE EEEECCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA