| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916837
Identifier: 229916837
GI number: 229916837
Start: 1088692
End: 1090002
Strand: Reverse
Name: 229916837
Synonym: EAT1b_1110
Alternate gene names: NA
Gene position: 1090002-1088692 (Counterclockwise)
Preceding gene: 229916838
Following gene: 229916836
Centisome position: 36.33
GC content: 54.92
Gene sequence:
>1311_bases ATGAAGCAACCGAAATATGCAGCACTTTTCCTAGCTGCCACACTCGCATTCGGAGGTATCGCGCCTTCGACAATCGTCAA CGCAGAAACGACGGAAGACGTGACTGCACCTGACGCACCTGTATTATCTGCACCACTCCACACATCGACATCACTCACGA TCACTGGTGAAGTGGCTGCGAAAGCGGAGATCTTGATCAACGGCAAGACGTACGTCCGTACGATCCTTGAAGGTGGCGAG GCCGTCTTCAAGATGTCACCACAGTCGGTCGGCAAAGTCATCGACGTCCGTCTCGTCGACGCGAGCGGCAACATCAGTGA GACGACACGCGCCATCGTCGCCGAAGACCCAGAAGCACGTCCGGACGCACCGGTCATCAAACCGTTGACGGAAACGTCGC GTGAAGTGCGCGTCGTCGGGGAGCCGGGACAATACGTCGAGCTCTCAATCGGCAGCAACACGTATAAAGGGAAGTTCGAT GCGAACGGTCTCTATCGCCGTGGCATCGCGCCGCAACCGGCCTACTCATGGCTTTCGGCGAAGACGATTACGACGAAAGG TGCGACGAGCGACGTCTCGAAACGCAGTGTCTATAAAGACCGCATCGCACCAAAGCCGGCGACATTGACTCAATCGGTGA CGGCGGCATCATACGGCGTCTTCGGAAAAGCCGAACCATTTGCGACGGCCATCGTCAAGATCGGTACGAAGTCATACACG GCACCGGTCATGTCGACCGGGAAGTTCATCGTGAAAATCCCGCGTCAAGCGATGGGGCAGAAGATGTCACTCGTCATCCG TGACGGTGCAGGCAACGTCAGCCAACCGAAGGCGATCACGGTACAGCACGCGCTCTATAACAACTTCCATCGTGTCTACA TGGAAGGCATGAAGTTGACGGTTCATAAAGAAGTCTTCTATGCAGATTCGACGACGAAATACGCGGACACGTTCGTGCCA CTCTTCGTCGGACATCCGTCGAAGTCGGGCCTCGGCTTCCTCCTCAGCAGCTACACGGAGGATGGCTCGGTCGCTGGATT TGAGAAGTTGACGCTCCGTGTCGGTCGTGCGACCTATTCTCAAAACATCAACGATTATGAAGTCTACTATGAAGAGTATG AGGACGGCTCGGTCGAAGAGTCATACTTGTTCCAGCCAGATTCGAAACTCATCAGCTTCGTCGACAAGTACGTCCGTCCG GAAAACCGGATCACGGTCATGGTCCAAGGAACGGATTACGACCTCGAGTTCAACCTATCGGGTGCGGAGAAACGCGCATT CATCCAATCGCTTCAATACGCAGGATACTAA
Upstream 100 bases:
>100_bases ATGCCTATTTTAGAAAAAATTATGTACCCTTTTTAAAAAGGACAGATTATAATAAATTTGTAAACGATTGTCATTATTCT TGAGGGGGACCCTACTTATT
Downstream 100 bases:
>100_bases TTCCTTAGGACCGGTGGAGACACCGGTCTTTTTGGTGAACGGAGTTGCATCATGAAAGACAAGCGAGATCTCATCTATTC GCTCAAACCACTGCCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKQPKYAALFLAATLAFGGIAPSTIVNAETTEDVTAPDAPVLSAPLHTSTSLTITGEVAAKAEILINGKTYVRTILEGGE AVFKMSPQSVGKVIDVRLVDASGNISETTRAIVAEDPEARPDAPVIKPLTETSREVRVVGEPGQYVELSIGSNTYKGKFD ANGLYRRGIAPQPAYSWLSAKTITTKGATSDVSKRSVYKDRIAPKPATLTQSVTAASYGVFGKAEPFATAIVKIGTKSYT APVMSTGKFIVKIPRQAMGQKMSLVIRDGAGNVSQPKAITVQHALYNNFHRVYMEGMKLTVHKEVFYADSTTKYADTFVP LFVGHPSKSGLGFLLSSYTEDGSVAGFEKLTLRVGRATYSQNINDYEVYYEEYEDGSVEESYLFQPDSKLISFVDKYVRP ENRITVMVQGTDYDLEFNLSGAEKRAFIQSLQYAGY
Sequences:
>Translated_436_residues MKQPKYAALFLAATLAFGGIAPSTIVNAETTEDVTAPDAPVLSAPLHTSTSLTITGEVAAKAEILINGKTYVRTILEGGE AVFKMSPQSVGKVIDVRLVDASGNISETTRAIVAEDPEARPDAPVIKPLTETSREVRVVGEPGQYVELSIGSNTYKGKFD ANGLYRRGIAPQPAYSWLSAKTITTKGATSDVSKRSVYKDRIAPKPATLTQSVTAASYGVFGKAEPFATAIVKIGTKSYT APVMSTGKFIVKIPRQAMGQKMSLVIRDGAGNVSQPKAITVQHALYNNFHRVYMEGMKLTVHKEVFYADSTTKYADTFVP LFVGHPSKSGLGFLLSSYTEDGSVAGFEKLTLRVGRATYSQNINDYEVYYEEYEDGSVEESYLFQPDSKLISFVDKYVRP ENRITVMVQGTDYDLEFNLSGAEKRAFIQSLQYAGY >Mature_436_residues MKQPKYAALFLAATLAFGGIAPSTIVNAETTEDVTAPDAPVLSAPLHTSTSLTITGEVAAKAEILINGKTYVRTILEGGE AVFKMSPQSVGKVIDVRLVDASGNISETTRAIVAEDPEARPDAPVIKPLTETSREVRVVGEPGQYVELSIGSNTYKGKFD ANGLYRRGIAPQPAYSWLSAKTITTKGATSDVSKRSVYKDRIAPKPATLTQSVTAASYGVFGKAEPFATAIVKIGTKSYT APVMSTGKFIVKIPRQAMGQKMSLVIRDGAGNVSQPKAITVQHALYNNFHRVYMEGMKLTVHKEVFYADSTTKYADTFVP LFVGHPSKSGLGFLLSSYTEDGSVAGFEKLTLRVGRATYSQNINDYEVYYEEYEDGSVEESYLFQPDSKLISFVDKYVRP ENRITVMVQGTDYDLEFNLSGAEKRAFIQSLQYAGY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47434; Mature: 47434
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPKYAALFLAATLAFGGIAPSTIVNAETTEDVTAPDAPVLSAPLHTSTSLTITGEVAA CCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCE KAEILINGKTYVRTILEGGEAVFKMSPQSVGKVIDVRLVDASGNISETTRAIVAEDPEAR EEEEEECCHHHHHHHHHCCCEEEEECHHHHCCEEEEEEEECCCCCCHHHEEEEECCCCCC PDAPVIKPLTETSREVRVVGEPGQYVELSIGSNTYKGKFDANGLYRRGIAPQPAYSWLSA CCCCCCCCHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHEE KTITTKGATSDVSKRSVYKDRIAPKPATLTQSVTAASYGVFGKAEPFATAIVKIGTKSYT EEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCC APVMSTGKFIVKIPRQAMGQKMSLVIRDGAGNVSQPKAITVQHALYNNFHRVYMEGMKLT CCHHCCCCEEEEECHHHCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEE VHKEVFYADSTTKYADTFVPLFVGHPSKSGLGFLLSSYTEDGSVAGFEKLTLRVGRATYS EEEEEEEECCCCCHHHCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHH QNINDYEVYYEEYEDGSVEESYLFQPDSKLISFVDKYVRPENRITVMVQGTDYDLEFNLS CCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECC GAEKRAFIQSLQYAGY CHHHHHHHHHHHHCCC >Mature Secondary Structure MKQPKYAALFLAATLAFGGIAPSTIVNAETTEDVTAPDAPVLSAPLHTSTSLTITGEVAA CCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCE KAEILINGKTYVRTILEGGEAVFKMSPQSVGKVIDVRLVDASGNISETTRAIVAEDPEAR EEEEEECCHHHHHHHHHCCCEEEEECHHHHCCEEEEEEEECCCCCCHHHEEEEECCCCCC PDAPVIKPLTETSREVRVVGEPGQYVELSIGSNTYKGKFDANGLYRRGIAPQPAYSWLSA CCCCCCCCHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHEE KTITTKGATSDVSKRSVYKDRIAPKPATLTQSVTAASYGVFGKAEPFATAIVKIGTKSYT EEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCC APVMSTGKFIVKIPRQAMGQKMSLVIRDGAGNVSQPKAITVQHALYNNFHRVYMEGMKLT CCHHCCCCEEEEECHHHCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEE VHKEVFYADSTTKYADTFVPLFVGHPSKSGLGFLLSSYTEDGSVAGFEKLTLRVGRATYS EEEEEEEECCCCCHHHCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHH QNINDYEVYYEEYEDGSVEESYLFQPDSKLISFVDKYVRPENRITVMVQGTDYDLEFNLS CCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECC GAEKRAFIQSLQYAGY CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA