| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916808
Identifier: 229916808
GI number: 229916808
Start: 1042405
End: 1044489
Strand: Direct
Name: 229916808
Synonym: EAT1b_1081
Alternate gene names: NA
Gene position: 1042405-1044489 (Clockwise)
Preceding gene: 229916806
Following gene: 229916809
Centisome position: 34.75
GC content: 55.35
Gene sequence:
>2085_bases ATGAAACGAATCTTACTCGTCCTCGTCTTGATCGGTGCGTGGGGGTCTGTCACCCCGACCGACTCCGCTCAAGCTGCGAC GAACCCTTTCCACATCCGCTCTGTCCCGAACGCCATCGTCTATGAGATGAAAAGCGGGAAGCTGACGAAAGTGGCGACCT ATTCGACGACGAAACGCTATGCGGCGATCAGTACGTCCGGTTGGTATTACATCGCCCTGAGCGGTGGGAAGAAAGTCTAC ATAAAGAAGAGTCAGGCGAAGCTTTTACTCGCCGATCCCATCACCCGTTCGAACCTGACATCGAGCGGGACAGCACGACT GGCGCACGAATACATGCGACAAATGGCACCACATGTCCCTTATGAATACGAGCGTCTCAGTGAAGCGAAGGCGATCGACT ACGCAAACCGGGCCCTTAAGGGGGATTGGTATGTCCCGTCCACACCGTATCGTCTATCCGTCCCAAACATCGACACGTTC GATTGGCATCGGGACATCCCGAGCTCTTCAAGCAACTCGTATCCGTTCCAGATCCACTATTTGACGGTGTTGAACCAATT GACACAAGCCTACAATGCGACAAACGACACCGCGTATTTGAAATACGGGATGCGCGTCGTGAAAAGTTGGACGAAAGCCC ACCCCGTCGCCAACTACAAACAATACCGCTGGCCATATAATGACCACGGCACATCGGTCCGGACGTTCCACTTGTTGAAC TTCTGGGACGTGTATAAGTCGTCGTCCCTTTACAAAGACACGGCATTCACAGGTCTGATGCTGCGGACGCTCCATGAGCA CGGCACGTTGCTCGCGACATCGAGTTTTTATAAGTACGAACATAACCACGGGGTGTTCCAAGACATGGCGCTCACGGCGA TCGCGCAGACGTTCCCACAGTTTGACCAAAGCGCGAATTGGAAAACCATTGCCGACAGCCGGCTCGATAAACAGATTCGC CACAGCATCACGTCGGATGCCGTCCATCTCGAGCATTCACCGGGCTATCAGGCATACATGTATCACGTGCTCGACCGTTT CGTCATCTGGGCGGACGAAAACCGCTTCACGCTCCCGTCCAGCATGAACCGTGTCGAGTATATGCCGAAACAGCTGACGT ATATGGTGAAGCCGAACGGGACGCTCCCGATTTTCGGGGACACGTCCGGGGCTCGGCGCACGACGTCGATCATCCCGCAT ATCGACGACTTCCCACAGCTCGCCTATGCGGTCTCTGGAGGGAAGGAAGGATCGCGCCCACCGCTCACGGTGAAGAAGAT CAGCACGCAGTATAGCTTCATGCGTGAATATTGGTCCGCCCCACCGCGTGCCTTCAATCAGGCGACGCAAGTGATGATGA CGGCGGGCTATCACAGTAGTGCCCATAAGCACGCCGATGATTTGAGCATCGACTTGTACGGGCTAGGTCGGGATTTCATC ATCGAGACGGGGCGCTACGGCTACACGAACCGTCCGGAACGTCAGCGCGTCTTCGGGGTCGATGCCCACAATACGATCCA TCGGGACGGGGCGAATCTCGACTTGAGCACGTCGATGCGCGAGAAGAGTAAGATCGTCACCGTCAAAAACCTCGGCCCAT CACTCCTCGCGATGGGTGAAAGCAAGCTCATCGGCAAAGGGGCGACCCATCGTCGGACGCTTGTCTATGACAAGGCGCAG ACGCTCGTCGTCTACGATCGGATCAGCTCCCCGACACAGGAGAAGTTCGTGCAGCGATTCCACCTTGCGGAAGGTCTGAA ACTGCTCCAGAGTTCGATGGCGACCCAGAACGTCGTCTATGGCGACTCGAACGGTCGGACGATCCAACTCATGCAGCTCA ACTTGAAAAATTCATCGATGCGCAACAGCACGAGTTTCGTCGCCGTCGAGGATTACGAATGGAAGCCGCGTCCGCAAGTC ATCTCGTATAACACCGGGAAAGACGTGCGCTATCTTACGCTCATCCGACTCGACCAGTCGAAGACGACGATCCGGTCGGC GAGTGTGAAAGTATCCGGTTCGAACTACATCGTGACGTACACGCTCTCGAATAAAGAGACGAGACAGATCAGTGTGCCAA TCTAA
Upstream 100 bases:
>100_bases CATTCCCTATTTGAAATTTAAAATATAGAAAATTAAGGAAATAAACTCACCTCATGGTATACTTTGAAAAAGAAGTAAAT CCAATTTTTGAGGTGTATCT
Downstream 100 bases:
>100_bases ATCAATGCAAAATTATTTCAATCTTCTAACGTTATCAGATGACCTCGAATCGATTCGAGGTCATCTTTTTTAAATCGTCA CACCTTTTCGTTGCAACGAT
Product: Heparinase II/III family protein
Products: NA
Alternate protein names: Heparinase III Protein Heparitin Sulfate Lyase; Heparinase III Protein; Heparinase II/III-Like; Glycosyltransferase
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI
Sequences:
>Translated_694_residues MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI >Mature_694_residues MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78787; Mature: 78787
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRY CHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE AAISTSGWYYIALSGGKKVYIKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVP EEEECCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC YEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTFDWHRDIPSSSSNSYPFQIHY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEH LTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEH FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQ HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHH FDQSANWKTIADSRLDKQIRHSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPS HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCEECCC SMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPHIDDFPQLAYAVSGGKEGSRP CCCHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCC PLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCEEE IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGE EECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCHHEECCC SKLIGKGATHRRTLVYDKAQTLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVY CCEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQVISYNTGKDVRYLTLIRLDQS ECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCC KTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI CCEEEEEEEEECCCCEEEEEEECCCCCCEEECCC >Mature Secondary Structure MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRY CHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE AAISTSGWYYIALSGGKKVYIKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVP EEEECCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC YEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTFDWHRDIPSSSSNSYPFQIHY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEH LTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEH FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQ HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHH FDQSANWKTIADSRLDKQIRHSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPS HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCEECCC SMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPHIDDFPQLAYAVSGGKEGSRP CCCHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCC PLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCEEE IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGE EECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCHHEECCC SKLIGKGATHRRTLVYDKAQTLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVY CCEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQVISYNTGKDVRYLTLIRLDQS ECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCC KTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI CCEEEEEEEEECCCCEEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA