| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvlB [H]
Identifier: 229916611
GI number: 229916611
Start: 833891
End: 835060
Strand: Reverse
Name: yvlB [H]
Synonym: EAT1b_0883
Alternate gene names: 229916611
Gene position: 835060-833891 (Counterclockwise)
Preceding gene: 229916612
Following gene: 229916609
Centisome position: 27.84
GC content: 56.24
Gene sequence:
>1170_bases GTGAAACAAGAAATGCGTGAACTGATTCTCCAGCAAGTGAAGGAAGGCAAGATGACAATCGAGGAGGCGATGACGCAACT CGAACGTCTCGAGCGACTCGAACCGGAACAGGTTCAAGCGCTTGAAGAGCGACAGGATACAGAAAAGGTCGATGCCTATT CGGTTGAATCGCTCACAACGAAACTGACATCTGCAGTGGAAGGGCTCGTGACGAAACTTCGCGACAGCGACTTTTCATTC AGCTCGAACTTTGGTCCGGAAGTGACGTATTCGAAGTCGTTCCCGTTCACAGGTAGCGACATCTCGCTCGACCTGTTCAA CGCGTCGGCGACGATCGTCTCGTCTGATGCTGAGGATTGTGAACTGATTGTCACGGGTCGTCCGCTTCGCCAACAAGACG CGGATAAGGCGCTCGAACAGTTACAGTCTGCGGTCAAGCACTCTGTCATTGGGGATCGTCTCGTCGTCTCGCTCCGTGAC AAGCTCGTCCGGGCCCACGTGGAACTGTACGTCCCGCACCACCATTTCAACCACCTGCTCGTTCAGACGTTGAACGGTGA AGTCCGGGCCGATGGTCTCGATGTCGAGAACGTTCGTGTGCAAACCGCAAACGGTCGGGTCGTGCTCCATGACGTGCATG CGTCGGAGCTCTTACTGAACACAGGGAATGGGACGGTCGAGGTCGAAGGTGTCGAAGCGGAACTCGTTCACGTCCGGACC GGAAACGGTGCCGTCATCGTCGGTGGGAAGTACGATAAAGCCTCCCTCAAGACGGGGAACGGAAACATCCGCGCGGAACT GGCGACAGCCCGTCCTGCCAAGTTTGAACTCGCGTCACTCGCCGGGAACATTCGACTCGTGTTACCACACGGCGTCGAGG TCGAAGGGGAGCTCGAGACGAACTTCGGTGGTCTCCATTGCTTGCTCGATGAGCTCGAGATCATCCGTGACCGCAAGGAC GTCGCACAGCGTCGTCTGGAATTCTTGTCGGGTCGTGGTCAAACCCCTCGCATCGAAGTCGAGGCGGGGACGCGTACCGG TACGATCGATTTGGAGCACGGTTCGGTCTATACGCCATCCACATTCCTTGATGAGGATAAAGTGGAACCGGCTGACCCGG TCGATCCCGTCGACCCAGGCGATTTAAACAATCCGTTCCATCAACAATAA
Upstream 100 bases:
>100_bases CACGAGTGAAACCGAAAGCAGGAAAAAAGAAATAAGTATAGAAATGGTGAGAAACGGGAAGGTAATTGACGTGCAACCAA ATTGAAGGGGGAAAACGAAC
Downstream 100 bases:
>100_bases GCAAATCCCGAAGGCGGCGCCTTCGGGATTTTTTGATTATAGATTCATTTCGTACTCCATCTGTTGCCAATCCATCATCT GCGTATCAAACAAAGTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ
Sequences:
>Translated_389_residues MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ >Mature_389_residues MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016599 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42882; Mature: 42882
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTT CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH KLTSAVEGLVTKLRDSDFSFSSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDC HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCC ELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRDKLVRAHVELYVPHHHFNHLL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHH VQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT HHHCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEECEEEEEEEEE GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELET CCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEHHHHCCCEEEEECCCCEEECEEEC NFGGLHCLLDELEIIRDRKDVAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCEECCC TFLDEDKVEPADPVDPVDPGDLNNPFHQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTT CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH KLTSAVEGLVTKLRDSDFSFSSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDC HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCC ELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRDKLVRAHVELYVPHHHFNHLL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHH VQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT HHHCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEECEEEEEEEEE GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELET CCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEHHHHCCCEEEEECCCCEEECEEEC NFGGLHCLLDELEIIRDRKDVAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCEECCC TFLDEDKVEPADPVDPVDPGDLNNPFHQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]