Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is gpmI [H]

Identifier: 229916589

GI number: 229916589

Start: 814318

End: 815856

Strand: Reverse

Name: gpmI [H]

Synonym: EAT1b_0861

Alternate gene names: 229916589

Gene position: 815856-814318 (Counterclockwise)

Preceding gene: 229916590

Following gene: 229916588

Centisome position: 27.2

GC content: 51.27

Gene sequence:

>1539_bases
ATGGCTAGACCAGTCGCACTCATCATTTTAGATGGTTTCGGGATGCGTGACGAATCGTTCGGAAACGCAGTCATGGCTGC
GAACAAACCGAACTTCGATCGCTACTGGGAGCAGTATCCACATACGCTCTTAAACGCAAAAGGCGAGTACGTCGGTCTTC
CGGAAGGACAGATGGGGAACTCAGAAGTCGGTCACTTGAACATCGGTGCCGGCCGAGTCGTCTATCAGTCACTCTCACGC
GTGAACAACGCAATCAAAGACCGTTCGTTATTCGACCGTCAGGCGATGAACCATTTGGCAGGTCATGTGAAGAAACATGA
TTCGAGCCTCCATATCATGGGTCTCGTATCAGATGGCGGGATTCACTCGCACATCAATCACATGTTTGCCATCGTTGAGT
TCGCAAAACTCCACGGCATCGAAAAAGTGTACATTCACGCGTTCACGGACGGCCGTGACTGTGATCCGAAATCAGGAGCT
GGTTTCCTCAAAGAAACAGAAGAAAAGCTTGCTGAACTCGGTGTCGGTCAAGTCGCTAGCGTGTCTGGTCGCTACTATGC
CATGGACCGCGACAACCGTTGGGAGCGCGTCGAGAAAGTATACGACGTCCTCGTAAACGGTAAAGGCGAAGTTGGCACGG
ACCCAGTCGAAGTTCTCAAGAAGTCTTACGAGAACGATTTGACGGATGAGTTTGTGTTACCAACTGTCATCGAAAAAGAT
GGCAAGCCGGTCGCGACAATCCAGGACAACGATGCCATCATGTTCTTCAACTTCCGTCCGGACCGGGCGATCCAACTCGC
AAAAGTGTTCAAAGAGAAAGTCGGCTTCAAAGGCTTCGAACTCTCAAGCAAACATCCAGAGAACATCTTGCTCGTCTCGA
TGACGAAGTTCTCGGATGAGGTCGACACGGATATCGTCTTCCCACCGGAAGATTTGAAAAACACACTCGGGGAAACGCTC
TCTGCACAAGGGTACAAACAACTCCGTGCTGCAGAAACAGAGAAGTACCCACACGTCACGTTCTTCTTGAACGGACAAAA
AGAACAACCATTTGAAGGTGAGGATCGTCTCCTTGTCCCTTCACCGAAAGTCGCGACGTACGACTTGCAACCAGAAATGA
GCGCATATGAGCTCACAGACGGTTTGCTCGAGCGTATCGAATCAGATGAGTATGATGCATACATCATCAACTTCGCAAAC
CCGGATATGGTTGGTCACTCAGGGAAGCTTGAGCCGACGAAGAAAGCGATCGAAGCGGTCGACGAATGCCTCGGTAAAGT
AGTGGACGCATTACTTGCTAAAGGTGGCGCGGCCATCATCACAGCGGACCACGGGAACGCGGACATCGTCACGAACCCGG
ATGGCTCACCGATGACGGCGCACACGACGGAACCTGTTCCATGTATCGTCACAAAAGAGGGAGTCGAACTGAAACCAGTT
CTCGACGGCGCACTTTGCGACCTCGCCCCAACGCTTCTTCACCTTCTCGGTGGAGAGCAACCAGCTGAAATGACTGGTTC
GTCAATCGTTACAAAATAA

Upstream 100 bases:

>100_bases
CATCAAAGAGTATATGGCACAGGAAGACATCGACGGCGCACTCGTCGGCGGTGCTTCACTTGAAGCCGCTTCGTTCCTCA
AATTGTTGGAGGCGATTTAA

Downstream 100 bases:

>100_bases
TACAACTATTTTTCAAACGAAAAGGAGCGATTTTTCATGTCAATGATTACAGAAATTTACGCACGCGAGATTTTAGATTC
ACGCGGTAACCCATCAGTAG

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSR
VNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGA
GFLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD
GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETL
SAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFAN
PDMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV
LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK

Sequences:

>Translated_512_residues
MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSR
VNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGA
GFLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD
GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETL
SAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFAN
PDMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV
LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK
>Mature_511_residues
ARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSRV
NNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAG
FLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKDG
KPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETLS
AQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANP
DMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPVL
DGALCDLAPTLLHLLGGEQPAEMTGSSIVTK

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=49.5088408644401, Blast_Score=500, Evalue=1e-143,
Organism=Caenorhabditis elegans, GI17507741, Length=521, Percent_Identity=45.2975047984645, Blast_Score=454, Evalue=1e-128,
Organism=Caenorhabditis elegans, GI32564249, Length=521, Percent_Identity=45.2975047984645, Blast_Score=454, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 56289; Mature: 56158

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGN
CCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHCCCCCEEECCCCCCCC
SEVGHLNIGAGRVVYQSLSRVNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGG
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
IHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAGFLKETEEKLAELGVGQVAS
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD
CCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCC
GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDE
CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCC
VDTDIVFPPEDLKNTLGETLSAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVP
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECC
SPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANPDMVGHSGKLEPTKKAIEAV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
DECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV
HHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHH
LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK
HCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
ARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGN
CCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHCCCCCEEECCCCCCCC
SEVGHLNIGAGRVVYQSLSRVNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGG
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
IHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAGFLKETEEKLAELGVGQVAS
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD
CCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCC
GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDE
CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCC
VDTDIVFPPEDLKNTLGETLSAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVP
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECC
SPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANPDMVGHSGKLEPTKKAIEAV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
DECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV
HHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHH
LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK
HCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]