| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is gpmI [H]
Identifier: 229916589
GI number: 229916589
Start: 814318
End: 815856
Strand: Reverse
Name: gpmI [H]
Synonym: EAT1b_0861
Alternate gene names: 229916589
Gene position: 815856-814318 (Counterclockwise)
Preceding gene: 229916590
Following gene: 229916588
Centisome position: 27.2
GC content: 51.27
Gene sequence:
>1539_bases ATGGCTAGACCAGTCGCACTCATCATTTTAGATGGTTTCGGGATGCGTGACGAATCGTTCGGAAACGCAGTCATGGCTGC GAACAAACCGAACTTCGATCGCTACTGGGAGCAGTATCCACATACGCTCTTAAACGCAAAAGGCGAGTACGTCGGTCTTC CGGAAGGACAGATGGGGAACTCAGAAGTCGGTCACTTGAACATCGGTGCCGGCCGAGTCGTCTATCAGTCACTCTCACGC GTGAACAACGCAATCAAAGACCGTTCGTTATTCGACCGTCAGGCGATGAACCATTTGGCAGGTCATGTGAAGAAACATGA TTCGAGCCTCCATATCATGGGTCTCGTATCAGATGGCGGGATTCACTCGCACATCAATCACATGTTTGCCATCGTTGAGT TCGCAAAACTCCACGGCATCGAAAAAGTGTACATTCACGCGTTCACGGACGGCCGTGACTGTGATCCGAAATCAGGAGCT GGTTTCCTCAAAGAAACAGAAGAAAAGCTTGCTGAACTCGGTGTCGGTCAAGTCGCTAGCGTGTCTGGTCGCTACTATGC CATGGACCGCGACAACCGTTGGGAGCGCGTCGAGAAAGTATACGACGTCCTCGTAAACGGTAAAGGCGAAGTTGGCACGG ACCCAGTCGAAGTTCTCAAGAAGTCTTACGAGAACGATTTGACGGATGAGTTTGTGTTACCAACTGTCATCGAAAAAGAT GGCAAGCCGGTCGCGACAATCCAGGACAACGATGCCATCATGTTCTTCAACTTCCGTCCGGACCGGGCGATCCAACTCGC AAAAGTGTTCAAAGAGAAAGTCGGCTTCAAAGGCTTCGAACTCTCAAGCAAACATCCAGAGAACATCTTGCTCGTCTCGA TGACGAAGTTCTCGGATGAGGTCGACACGGATATCGTCTTCCCACCGGAAGATTTGAAAAACACACTCGGGGAAACGCTC TCTGCACAAGGGTACAAACAACTCCGTGCTGCAGAAACAGAGAAGTACCCACACGTCACGTTCTTCTTGAACGGACAAAA AGAACAACCATTTGAAGGTGAGGATCGTCTCCTTGTCCCTTCACCGAAAGTCGCGACGTACGACTTGCAACCAGAAATGA GCGCATATGAGCTCACAGACGGTTTGCTCGAGCGTATCGAATCAGATGAGTATGATGCATACATCATCAACTTCGCAAAC CCGGATATGGTTGGTCACTCAGGGAAGCTTGAGCCGACGAAGAAAGCGATCGAAGCGGTCGACGAATGCCTCGGTAAAGT AGTGGACGCATTACTTGCTAAAGGTGGCGCGGCCATCATCACAGCGGACCACGGGAACGCGGACATCGTCACGAACCCGG ATGGCTCACCGATGACGGCGCACACGACGGAACCTGTTCCATGTATCGTCACAAAAGAGGGAGTCGAACTGAAACCAGTT CTCGACGGCGCACTTTGCGACCTCGCCCCAACGCTTCTTCACCTTCTCGGTGGAGAGCAACCAGCTGAAATGACTGGTTC GTCAATCGTTACAAAATAA
Upstream 100 bases:
>100_bases CATCAAAGAGTATATGGCACAGGAAGACATCGACGGCGCACTCGTCGGCGGTGCTTCACTTGAAGCCGCTTCGTTCCTCA AATTGTTGGAGGCGATTTAA
Downstream 100 bases:
>100_bases TACAACTATTTTTCAAACGAAAAGGAGCGATTTTTCATGTCAATGATTACAGAAATTTACGCACGCGAGATTTTAGATTC ACGCGGTAACCCATCAGTAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSR VNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGA GFLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETL SAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFAN PDMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK
Sequences:
>Translated_512_residues MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSR VNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGA GFLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETL SAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFAN PDMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK >Mature_511_residues ARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGNSEVGHLNIGAGRVVYQSLSRV NNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGGIHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAG FLKETEEKLAELGVGQVASVSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKDG KPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDEVDTDIVFPPEDLKNTLGETLS AQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVPSPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANP DMVGHSGKLEPTKKAIEAVDECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPVL DGALCDLAPTLLHLLGGEQPAEMTGSSIVTK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=49.5088408644401, Blast_Score=500, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17507741, Length=521, Percent_Identity=45.2975047984645, Blast_Score=454, Evalue=1e-128, Organism=Caenorhabditis elegans, GI32564249, Length=521, Percent_Identity=45.2975047984645, Blast_Score=454, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56289; Mature: 56158
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGN CCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHCCCCCEEECCCCCCCC SEVGHLNIGAGRVVYQSLSRVNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGG CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC IHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAGFLKETEEKLAELGVGQVAS HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE VSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD CCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCC GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDE CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCC VDTDIVFPPEDLKNTLGETLSAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVP CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECC SPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANPDMVGHSGKLEPTKKAIEAV CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH DECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV HHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHH LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK HCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure ARPVALIILDGFGMRDESFGNAVMAANKPNFDRYWEQYPHTLLNAKGEYVGLPEGQMGN CCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHCCCCCEEECCCCCCCC SEVGHLNIGAGRVVYQSLSRVNNAIKDRSLFDRQAMNHLAGHVKKHDSSLHIMGLVSDGG CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC IHSHINHMFAIVEFAKLHGIEKVYIHAFTDGRDCDPKSGAGFLKETEEKLAELGVGQVAS HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE VSGRYYAMDRDNRWERVEKVYDVLVNGKGEVGTDPVEVLKKSYENDLTDEFVLPTVIEKD CCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCC GKPVATIQDNDAIMFFNFRPDRAIQLAKVFKEKVGFKGFELSSKHPENILLVSMTKFSDE CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCC VDTDIVFPPEDLKNTLGETLSAQGYKQLRAAETEKYPHVTFFLNGQKEQPFEGEDRLLVP CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECC SPKVATYDLQPEMSAYELTDGLLERIESDEYDAYIINFANPDMVGHSGKLEPTKKAIEAV CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH DECLGKVVDALLAKGGAAIITADHGNADIVTNPDGSPMTAHTTEPVPCIVTKEGVELKPV HHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEECCCCCCEEEEECCCCEEEHH LDGALCDLAPTLLHLLGGEQPAEMTGSSIVTK HCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]