| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916492
Identifier: 229916492
GI number: 229916492
Start: 716839
End: 717498
Strand: Reverse
Name: 229916492
Synonym: EAT1b_0762
Alternate gene names: NA
Gene position: 717498-716839 (Counterclockwise)
Preceding gene: 229916493
Following gene: 229916490
Centisome position: 23.92
GC content: 50.3
Gene sequence:
>660_bases ATGGTAGGAGTAGGAATTGATGGTGCACGTGGCGGCTGGGTACGGATCACATACGACAGCATCTCACTTTGTTTAACGAT TTCGGAGACGTTGGAGGAGTTACTGATTGATGGTGCCATGCATTTTGTGGATATGCCGAAAGATTTAGGAACGGTCGACC ATCCGATCCGCGAATGCGATGCGTGGATGCGTTGCCGACTCAGCCAACGAAAGTCGTCCGTCTTCACTCCGCCGATTCAA GAGGTGTTGCACGAAGCGACTTATGAGGAAGCGAATGAAAGGAGTCGGGCGTTGGTTGGTAAAGGGATTAGTAAACAAGC GTGGAATCTTGTTCCCCGGATCCGTGAGTTTCAGCAGGTGAAGGCATCTGACGTTTACGAATCACATCCGGAAGTTTGTT TCTCGGTCATGATGGGACATGAGGCCAGTCATTCGAAAAAGACGGTCGAAGGGCAGGATGAGCGAATCGAGTTACTTCGG CAATACTCGAAAAGTTCTCCATGGAAATGGAAGATGTCGAACGTCCAAATCGACGATATTATCGATGCGTGTATCTTGGC GGTAGCTGCCTATGAAGCGGGGACCAGTGGTCTCTCGCTCCAGCCGGCAGAATCCGATCAACCGGTAGTGGCTGTACCTC AAATGAAAAAAGAGCGATGA
Upstream 100 bases:
>100_bases TGTGGCCTATGCTACACGGTTTGGCCGAACCGTATTTGGTTAGGGAGTACAGTGTTTCTCGCCGTATTTGGCGTGTTGAT GATGTTACAGGAGGTACGAC
Downstream 100 bases:
>100_bases AATCAACATTTCATCGCTCTTTTGCTGTCGTCGTAGGCGGACCGACGATAAATCGCCATATGTAATGAAACACTTTGGCA TTGTATACGGCTTTTAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER
Sequences:
>Translated_219_residues MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER >Mature_219_residues MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER
Specific function: Unknown
COG id: COG4923
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24577; Mature: 24577
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECD CCCCCCCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH AWMRCRLSQRKSSVFTPPIQEVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLRQYSKSSPWKWKMSNVQIDDI HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH IDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECD CCCCCCCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH AWMRCRLSQRKSSVFTPPIQEVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLRQYSKSSPWKWKMSNVQIDDI HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH IDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA