| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is murC
Identifier: 229916435
GI number: 229916435
Start: 660656
End: 661963
Strand: Reverse
Name: murC
Synonym: EAT1b_0705
Alternate gene names: 229916435
Gene position: 661963-660656 (Counterclockwise)
Preceding gene: 229916436
Following gene: 229916434
Centisome position: 22.07
GC content: 46.18
Gene sequence:
>1308_bases ATGAACCGTTATCACTTCGTCGGAATTAAAGGAACGGGCATGAGTCCTTTAGCTCAAATTTTATTTGATATGAACAATGA GGTCCGTGGATCGGACGTTGAAAAAGCATTTTTTACAGAAGAAGCATTGAACCGTAAAGGGATTGAAATTTTGCCATTCG ATCCTGAAAATATTTCGGAAGACCAAATCGTTGTGCAAGGAAACGCGTTCAGTGATGATCATCCAGAAATCGTGCGTGCG CGTGAACTCGGATTGACGATTTATAAGTATTATGAGTTTTTAGGTGAACTCGCGAACCATTACACGAGTGTCGCTATCAC CGGGTCACACGGGAAGACGTCAACGACGGGATTACTTGCACACGTCATGCGTGGAATCGAACCGACATCGTTCTTAATCG GCGATGGCACGGGAGAAGGAGTGGCGGATTCGAAAAACTTCGTCTTCGAAGCTTGTGAGTACAAGCGTCATTTCTTATAC TACCGTCCAGACTACGCGATTATGACGAATATCGACTTTGACCATTCGGACTATTTCTCTGGTCTTGATGACGTCATTGA CGCTTTCCAAGAAATGGCGAAACAAGTGAAGAAAGGAATCATTGCTTGTGGCGATGACGAAAATCTTCAACAGATTCAAG CCAACGTGCCGCTCGTCTATTATGGTTTCGGGGCGCACAATGATTTCCGTGCTGAACAGGTCACATCGACAGAAAATGGA ACGACATTTGATGTCTTTTTACGTGATGACTTCTACGGAACGTTCCGGATTCCTGGATATGGAGACCACAGCGTGTTGAA CGCGCTCGCTGTCATTGCGACATGCGACTACGAGAACTTGCCGAAAGAATTGGTGAAAGAGCGTCTTGAGACGTTCAATG GTGTAAAACGCCGATTCAGTGAATCGACGTTAAACGACCAAGTGCTTGTCGATGACTACGCGCATCATCCGCGGGAGATC AGTGCAACGGTCGAAGCGGCTCGGAAAAAGTATGGCAATCGAGAAGTCGTTGCGATTTTCCAACCACATACGTATACACG CTTGAAATCATTCATGGACGATTTTGCGACGGCATTGGCCGAAGCGGACACTGTCTATTTATGTGATATTTTCGGTTCAG CACGTGAGCAGGAAGGAACGGTCACGATCGAAGACCTCCAATCACGAATCGAAGGCGCGCATATTTTAAAACGTGGTGGT ACAGGCGTGTTACGCAACCATGCCGATGCCGTGCTCTTATTCATGGGTGCCGGTGATATTCAAACGTATCAGCGCGAATA TGAAGAAGTTGTAAAACTTGAAGCATAA
Upstream 100 bases:
>100_bases AACAATAATCTGTAATAGCACGACTCTGTGAGTTTTGCTATAATGACAAAGGTTTGTCGCATTTTGACGAGCCGTAATGA ATTAGGGGGGCTATTTACAG
Downstream 100 bases:
>100_bases GTGTGAAGGGAGACGAAAGTCTCTCTTTTTTATGTTTAGCCATCCAAAATCTCGGTAATAGTAGTATCGATGAATATGAC AAAGGAGATGTTAGGAATGG
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISEDQIVVQGNAFSDDHPEIVRA RELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLAHVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLY YRPDYAIMTNIDFDHSDYFSGLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENG TTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFSESTLNDQVLVDDYAHHPREI SATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALAEADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGG TGVLRNHADAVLLFMGAGDIQTYQREYEEVVKLEA
Sequences:
>Translated_435_residues MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISEDQIVVQGNAFSDDHPEIVRA RELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLAHVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLY YRPDYAIMTNIDFDHSDYFSGLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENG TTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFSESTLNDQVLVDDYAHHPREI SATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALAEADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGG TGVLRNHADAVLLFMGAGDIQTYQREYEEVVKLEA >Mature_435_residues MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISEDQIVVQGNAFSDDHPEIVRA RELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLAHVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLY YRPDYAIMTNIDFDHSDYFSGLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENG TTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFSESTLNDQVLVDDYAHHPREI SATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALAEADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGG TGVLRNHADAVLLFMGAGDIQTYQREYEEVVKLEA
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=461, Percent_Identity=28.8503253796095, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1790680, Length=389, Percent_Identity=28.0205655526992, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_EXISA (C4L4P1)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002885081.1 - ProteinModelPortal: C4L4P1 - GeneID: 7871477 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0705 - OMA: YHEFLGD - ProtClustDB: PRK00421 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 48911; Mature: 48911
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISE CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCC DQIVVQGNAFSDDHPEIVRARELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLA CEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH HVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLYYRPDYAIMTNIDFDHSDYFS HHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHHHC GLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENG CHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCC TTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFS CEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHH ESTLNDQVLVDDYAHHPREISATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALA HCCCCCCEEECHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH EADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGGTGVLRNHADAVLLFMGAGDI CCCEEEEEECCCCCCCCCCCEEHHHHHHHHCHHHHHHCCCCCHHHCCCCEEEEEECCCCH QTYQREYEEVVKLEA HHHHHHHHHHHHCCC >Mature Secondary Structure MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISE CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCC DQIVVQGNAFSDDHPEIVRARELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLA CEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH HVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLYYRPDYAIMTNIDFDHSDYFS HHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHHHC GLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENG CHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCC TTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFS CEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHH ESTLNDQVLVDDYAHHPREISATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALA HCCCCCCEEECHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH EADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGGTGVLRNHADAVLLFMGAGDI CCCEEEEEECCCCCCCCCCCEEHHHHHHHHCHHHHHHCCCCCHHHCCCCEEEEEECCCCH QTYQREYEEVVKLEA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA