| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mrgA [H]
Identifier: 229916434
GI number: 229916434
Start: 660107
End: 660559
Strand: Reverse
Name: mrgA [H]
Synonym: EAT1b_0704
Alternate gene names: 229916434
Gene position: 660559-660107 (Counterclockwise)
Preceding gene: 229916435
Following gene: 229916432
Centisome position: 22.02
GC content: 41.28
Gene sequence:
>453_bases ATGGCTAGTCAAGTTGCGCTCAACACATTGAACAAAGAAGTAGCGAACTATGGATTACTGTTTGTGAAACTTCATAATTA TCACTGGTATATCAGTGGACCGCACTTCTTCACGTATCATGAAAAACTAGAAGAGCTCTATAATTTAGTGGCAGAACTTT ATGATGACGTGGCAGAACGCCTACTAATGAATGACGGCGAACCGTTTGCGACGATGAAAGAGTATCTTGAACATTCGACG TTAAAAGAAGGCGATCGTCATGCCGAGACAGATCAGATGATTAAAGACATCATCAGTGACTTCAAACAAATCCGTCAAGA GATGCAAGACGCGATGGAGAAATTTGAGGATGGCGATGAGGCGATTGAAGATACATTCGTCTCTCATATCGAGCGACTCG AAAAAGAAATTTGGATGATGTCTGCAGCCCTCGGGAAGAAAACAAAATTATAA
Upstream 100 bases:
>100_bases ATAAGTGTGAAGGGAGACGAAAGTCTCTCTTTTTTATGTTTAGCCATCCAAAATCTCGGTAATAGTAGTATCGATGAATA TGACAAAGGAGATGTTAGGA
Downstream 100 bases:
>100_bases ACATAAAAATGGTGCGCCTTTGTCAGGCGCACCATTTTTATGTTATTTCAAGTTTTCTGGATTAAGCGGAAGCAAGGCAT CGATGACGAAACGTCCGTCT
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MASQVALNTLNKEVANYGLLFVKLHNYHWYISGPHFFTYHEKLEELYNLVAELYDDVAERLLMNDGEPFATMKEYLEHST LKEGDRHAETDQMIKDIISDFKQIRQEMQDAMEKFEDGDEAIEDTFVSHIERLEKEIWMMSAALGKKTKL
Sequences:
>Translated_150_residues MASQVALNTLNKEVANYGLLFVKLHNYHWYISGPHFFTYHEKLEELYNLVAELYDDVAERLLMNDGEPFATMKEYLEHST LKEGDRHAETDQMIKDIISDFKQIRQEMQDAMEKFEDGDEAIEDTFVSHIERLEKEIWMMSAALGKKTKL >Mature_149_residues ASQVALNTLNKEVANYGLLFVKLHNYHWYISGPHFFTYHEKLEELYNLVAELYDDVAERLLMNDGEPFATMKEYLEHSTL KEGDRHAETDQMIKDIISDFKQIRQEMQDAMEKFEDGDEAIEDTFVSHIERLEKEIWMMSAALGKKTKL
Specific function: Forms highly stable, multimeric protein-DNA complexes which accumulate in stationary-phase cells and protect against oxidative killing [H]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17639; Mature: 17508
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQVALNTLNKEVANYGLLFVKLHNYHWYISGPHFFTYHEKLEELYNLVAELYDDVAER CCCHHHHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLMNDGEPFATMKEYLEHSTLKEGDRHAETDQMIKDIISDFKQIRQEMQDAMEKFEDGDE HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIEDTFVSHIERLEKEIWMMSAALGKKTKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASQVALNTLNKEVANYGLLFVKLHNYHWYISGPHFFTYHEKLEELYNLVAELYDDVAER CCHHHHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLMNDGEPFATMKEYLEHSTLKEGDRHAETDQMIKDIISDFKQIRQEMQDAMEKFEDGDE HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AIEDTFVSHIERLEKEIWMMSAALGKKTKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8396117; 9353931; 9384377; 8709848 [H]