Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ytxK [H]

Identifier: 229916415

GI number: 229916415

Start: 638641

End: 639534

Strand: Reverse

Name: ytxK [H]

Synonym: EAT1b_0685

Alternate gene names: 229916415

Gene position: 639534-638641 (Counterclockwise)

Preceding gene: 229916416

Following gene: 229916414

Centisome position: 21.32

GC content: 45.53

Gene sequence:

>894_bases
ATGGAACGTTTTGAACAACTCTATCGTGATTGGAAAAAGGAAGCGAAGAAACTAGTCAACGACCTGGATGTATTACCGAT
CGAGGCACTCGTCCAAGTATTTGACCATGTTGACATTGAAAAAGAGAAGATGGACGATGTCCGTAAAGCTGTGAGTTTAC
TCGTCTTGGAAGAAACGACACAACTCCCTCCGAACAATCAACCGACACCGGATGCGGTCAGCCTATTTATGGGTTATCTA
GCTACGAAGCTGCTTAAGGAAAATGCGACGATTCTAGACTTAGGTAGTGGGACAGGTACGTTGACGCATGCCATTCTTTC
TCAGTTAAAAGATGCTACAGCACAGGCGGTCGAAGTAGACGAACTGTTGCTTCGTCTTTCCTACTCCATGAGTAACTTGT
TAGGAGAACCGGTATCCTACTTCCATCAAGACGCACTTGCTCCTCTGTTTGTTGAACCGAGCGACCTTTCCGTTGCTGAC
TTGCCGATCGGCTATTATCCAAATGATGAAGTGGCAGCCAGTTACGATATGAAACGAGAAGAAGGACATGCCTATTCGCA
TTTCCTCTTGATGGAACAGGCGATTCGCCATACGAAACCAGGTGGGCATGGATTATTTGTCATCCCGAACAATTTGTTTG
AACAGGATGACGAAGGGAAATTAAAACAATGGATGGACCGTGAGGCTGTTGTGAAAGGGGTCATTCAACTTCCGACGACG
ATGTTCAAAGACGAGCGTTACGCGAAAAGCTTATTGCTTCTTCAAAAAGTAGGAGAAGGCGTCACACGACCGAAACAAGC
GCTATTCGTGGAACTTCCGTCATTCACTGATGTGAGAGCGGTAGCCAATGTCGTGAAACAGATTGACGAGTGGTTCAAAA
CAACTCAAAAATAA

Upstream 100 bases:

>100_bases
TTGATTCGTTTGGCGAAATTGATTAAAATAGCTTACACTAGTACGTGAACCGACCGGTCCTCTCATGGGGGCCGGTTTTG
TATGGAAAGGATGAACGAAA

Downstream 100 bases:

>100_bases
TGGACAAAATACTTGAAAAAGGTATGCAAAATCAAGTATCTTCATTATGATACAGTTATCAGTTTTAAATTGAACAGATA
AAGATATGCGTTTAAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL
ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD
LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT
MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK

Sequences:

>Translated_297_residues
MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL
ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD
LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT
MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK
>Mature_297_residues
MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL
ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD
LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT
MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK

Specific function: Unknown

COG id: COG0827

COG function: function code L; Adenine-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To type I restriction system adenine methylases [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003356
- InterPro:   IPR002296
- InterPro:   IPR016843 [H]

Pfam domain/function: PF02384 N6_Mtase [H]

EC number: NA

Molecular weight: Translated: 33561; Mature: 33561

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETT
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QLPPNNQPTPDAVSLFMGYLATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVADLPIGYYPNDEVAASYDMKRE
HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCHHH
EGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT
CCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK
HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETT
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QLPPNNQPTPDAVSLFMGYLATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVADLPIGYYPNDEVAASYDMKRE
HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCHHH
EGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT
CCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK
HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 8226682 [H]