| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is nap [H]
Identifier: 229916368
GI number: 229916368
Start: 590549
End: 591361
Strand: Direct
Name: nap [H]
Synonym: EAT1b_0638
Alternate gene names: 229916368
Gene position: 590549-591361 (Clockwise)
Preceding gene: 229916367
Following gene: 229916369
Centisome position: 19.69
GC content: 43.91
Gene sequence:
>813_bases ATGTTGCATTATAAAACCTACACGATTAGTGATGACCATCCTTGGGTCATCTTCATACACGGGGCCGGAGGAAGTTTATC ACATTGGTATCGTCAACTTCGTCCCTTCCGTAAAAAATATAATGTCCTGCTCGTCGATTTACGCGGTCATGGCGGTTCAT ACGATGCTGAACAGTCGCTCAAACAACCGTTGAACGCTTATACATTTGATGTCGTCGCCAAGGACGTCATTGAAGTCATG GATCACTTAGGTATCGAAAAAGGACACATGGTCGGTCTATCTTTAGGAACGATTGTGATTCAGGCGATGTTTGAGCACTA TCCCGATCGAATCGCATCGGTCGTTCTCGGCGGAGCCATCGTCAAATTCAATGTCCGCTCCACGATGCTCATCCGACTTG GTAGTCTTGTGCAAAACTTTGTCCCATACATGTGGTTATATAAATTATTCGCATGGATTTTACTCCCGAAGAAGCGTCAC AAAAAGTCTCGGATGATGTTCGTCCGCGATGCGGCGAACTTATGTCAACGCGAGTTTATCCGTTGGTTCAAAATGACGGA AAATATTAATCCTTTACTGAATCAGTTCACTTCGATTCAGACGAACGTCCCGATTTTATATATTATGGGTGATGAGGATT ATATGTTCCTTGAAGCTGTCGAACGGACAGCGAAACATCAGCCGACAGCCAATGTTGAAATCGTTGCAGACTCTGGTCAT GTGGTCAATGTAGACCAACCCGATCAATTCAATGCGTTATCGATGAATTTTATCGATGATCAGATTCAAGCACGTTCACT ACAAATGAGCTAA
Upstream 100 bases:
>100_bases CCCTCAACTTGAATGAACGTCGTTTGTAGAGCTTCGACATCAAGTATGATATACTCATTTTATGGTTAAATGAACTTAAA ATTTTTGGAGGATAGCGTTC
Downstream 100 bases:
>100_bases TTCAGGATGCCACAGGGCTTCCTGAATTTTTTTATGTTTATTTTCAGAAAATATTGATTATTACAAAAATAGATGGTATT CTTTAGCAAATCCAACGAAG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLHYKTYTISDDHPWVIFIHGAGGSLSHWYRQLRPFRKKYNVLLVDLRGHGGSYDAEQSLKQPLNAYTFDVVAKDVIEVM DHLGIEKGHMVGLSLGTIVIQAMFEHYPDRIASVVLGGAIVKFNVRSTMLIRLGSLVQNFVPYMWLYKLFAWILLPKKRH KKSRMMFVRDAANLCQREFIRWFKMTENINPLLNQFTSIQTNVPILYIMGDEDYMFLEAVERTAKHQPTANVEIVADSGH VVNVDQPDQFNALSMNFIDDQIQARSLQMS
Sequences:
>Translated_270_residues MLHYKTYTISDDHPWVIFIHGAGGSLSHWYRQLRPFRKKYNVLLVDLRGHGGSYDAEQSLKQPLNAYTFDVVAKDVIEVM DHLGIEKGHMVGLSLGTIVIQAMFEHYPDRIASVVLGGAIVKFNVRSTMLIRLGSLVQNFVPYMWLYKLFAWILLPKKRH KKSRMMFVRDAANLCQREFIRWFKMTENINPLLNQFTSIQTNVPILYIMGDEDYMFLEAVERTAKHQPTANVEIVADSGH VVNVDQPDQFNALSMNFIDDQIQARSLQMS >Mature_270_residues MLHYKTYTISDDHPWVIFIHGAGGSLSHWYRQLRPFRKKYNVLLVDLRGHGGSYDAEQSLKQPLNAYTFDVVAKDVIEVM DHLGIEKGHMVGLSLGTIVIQAMFEHYPDRIASVVLGGAIVKFNVRSTMLIRLGSLVQNFVPYMWLYKLFAWILLPKKRH KKSRMMFVRDAANLCQREFIRWFKMTENINPLLNQFTSIQTNVPILYIMGDEDYMFLEAVERTAKHQPTANVEIVADSGH VVNVDQPDQFNALSMNFIDDQIQARSLQMS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI145611434, Length=251, Percent_Identity=25.4980079681275, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 31167; Mature: 31167
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHYKTYTISDDHPWVIFIHGAGGSLSHWYRQLRPFRKKYNVLLVDLRGHGGSYDAEQSL CCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH KQPLNAYTFDVVAKDVIEVMDHLGIEKGHMVGLSLGTIVIQAMFEHYPDRIASVVLGGAI HCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEE VKFNVRSTMLIRLGSLVQNFVPYMWLYKLFAWILLPKKRHKKSRMMFVRDAANLCQREFI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH RWFKMTENINPLLNQFTSIQTNVPILYIMGDEDYMFLEAVERTAKHQPTANVEIVADSGH HHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCC VVNVDQPDQFNALSMNFIDDQIQARSLQMS EEECCCCCCCCEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MLHYKTYTISDDHPWVIFIHGAGGSLSHWYRQLRPFRKKYNVLLVDLRGHGGSYDAEQSL CCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH KQPLNAYTFDVVAKDVIEVMDHLGIEKGHMVGLSLGTIVIQAMFEHYPDRIASVVLGGAI HCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEE VKFNVRSTMLIRLGSLVQNFVPYMWLYKLFAWILLPKKRHKKSRMMFVRDAANLCQREFI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH RWFKMTENINPLLNQFTSIQTNVPILYIMGDEDYMFLEAVERTAKHQPTANVEIVADSGH HHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCC VVNVDQPDQFNALSMNFIDDQIQARSLQMS EEECCCCCCCCEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]