| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916369
Identifier: 229916369
GI number: 229916369
Start: 591666
End: 592685
Strand: Direct
Name: 229916369
Synonym: EAT1b_0639
Alternate gene names: NA
Gene position: 591666-592685 (Clockwise)
Preceding gene: 229916368
Following gene: 229916379
Centisome position: 19.72
GC content: 51.27
Gene sequence:
>1020_bases ATGGAAGTGAAGCAGTATATGATGGATCGAATGGTAAAAATTTCAGCAGGGATGGCAAACGCCGTTCTCGTCACGCTCGG TGTCGGTTTATTGATTGAGACGATTGGTAATTTGACCGGAATCGCGATGCTCGTACAGATTGGACAAGTCGCCAAATCAC TATTGGCACCCGCTTTAGGCGCTGGCGTCGCGTTTCAACTTGGAAGCAACACGCTCATCCTATTTAGCGCCATGATTGCC GCAACCATTGGCGGTGCAGCTTTAAAAGCAACAGAAAGCGGACTCGTCCTCGTTCCAGGTCAACCGATTAGCGCACTGAT CGCAGCGGCGGCTGCTGTCTGGCTTGGAAAACGTGTCCTCGGAAAAACAAAGTTTGATATGATGGTCGTTCCGGTCACAG CCGTATTAGGTGGTGGAATCGTTGGGGTTGCTGCAGCTGCGGTCACGACTCCTCTTATCAACTCAATCAGTCAAGGGATC ACTGCATCTGTAGAAACGTCGCCGATTGCCACATCTCTTGTCATCGCACTTGTTTTCAGTGTCATGCTCATGTCGCCTGC ATCATCTGCCGCACTCGCCATCGCGCTTCAACTTGACCCTGTCGCCAGCGCCGCTGCCTTGATTGGTTGCTCTGCTCAAT TTGTTGGATTTACCTTAATGGCATATCGTCAAACCGACCCAGGTGGATTGGTCGCCTCATTCTTCGTCACACCGAAAGTG CAGTTTCCGAATATCATCAAAAATCCGCGAATCGTCGTCCCACCGTTTATCGCCGCGATGATTTCCGCACCGATTGCTAC TTTGATGTTCTCACTCCAAGTCCCATATGAAATTGCGGGTCTCGGGCTCAACTCCTTGATTGCCCCGCTTCAGATTTTAG CGGTCCAAGGGTTGGATGCCTTTCTCATCTTCACGATGACCGGCGTCGTACTCCCTGCCCTCATTACGTGGGCCCTCTAT CGTGTGACGAGTCTTGTCGGATGGACCAAGTTCGGTGATCTCGCACTCGAGATTCAATAA
Upstream 100 bases:
>100_bases CCTTGTTCCCGTGGTAATCGGACAGGCGCCTGTAGATTGAAACCGCGCCTATCCTTGATGGATAGGTTTTTTTTATTGAC ACAAAGACATAGAGGAGATG
Downstream 100 bases:
>100_bases TAAAAGGAGCGTTGTCACAGGTGGACAACGCTCCATATTTTTTACGCTCGAAGTTCAGCGCCGTGTGTCGCACGGACCGC CTCGACAATTGTTTCATATG
Product: regulatory protein (PfoS/R)
Products: NA
Alternate protein names: Integral Membrane Protein; PfoR Protein; Regulatory Protein PfoS/R; Regulatory Protein; PTS System EIIC Component; PTS System Transporter Subunit EIIC; Phosphotransferase System Transporter Subunit EIIC; Xin Regulator; PTS System Protein; PTS System EIIc Component; Xin Regulator PfoR; Phosphotransferase System EIIC Family Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MEVKQYMMDRMVKISAGMANAVLVTLGVGLLIETIGNLTGIAMLVQIGQVAKSLLAPALGAGVAFQLGSNTLILFSAMIA ATIGGAALKATESGLVLVPGQPISALIAAAAAVWLGKRVLGKTKFDMMVVPVTAVLGGGIVGVAAAAVTTPLINSISQGI TASVETSPIATSLVIALVFSVMLMSPASSAALAIALQLDPVASAAALIGCSAQFVGFTLMAYRQTDPGGLVASFFVTPKV QFPNIIKNPRIVVPPFIAAMISAPIATLMFSLQVPYEIAGLGLNSLIAPLQILAVQGLDAFLIFTMTGVVLPALITWALY RVTSLVGWTKFGDLALEIQ
Sequences:
>Translated_339_residues MEVKQYMMDRMVKISAGMANAVLVTLGVGLLIETIGNLTGIAMLVQIGQVAKSLLAPALGAGVAFQLGSNTLILFSAMIA ATIGGAALKATESGLVLVPGQPISALIAAAAAVWLGKRVLGKTKFDMMVVPVTAVLGGGIVGVAAAAVTTPLINSISQGI TASVETSPIATSLVIALVFSVMLMSPASSAALAIALQLDPVASAAALIGCSAQFVGFTLMAYRQTDPGGLVASFFVTPKV QFPNIIKNPRIVVPPFIAAMISAPIATLMFSLQVPYEIAGLGLNSLIAPLQILAVQGLDAFLIFTMTGVVLPALITWALY RVTSLVGWTKFGDLALEIQ >Mature_339_residues MEVKQYMMDRMVKISAGMANAVLVTLGVGLLIETIGNLTGIAMLVQIGQVAKSLLAPALGAGVAFQLGSNTLILFSAMIA ATIGGAALKATESGLVLVPGQPISALIAAAAAVWLGKRVLGKTKFDMMVVPVTAVLGGGIVGVAAAAVTTPLINSISQGI TASVETSPIATSLVIALVFSVMLMSPASSAALAIALQLDPVASAAALIGCSAQFVGFTLMAYRQTDPGGLVASFFVTPKV QFPNIIKNPRIVVPPFIAAMISAPIATLMFSLQVPYEIAGLGLNSLIAPLQILAVQGLDAFLIFTMTGVVLPALITWALY RVTSLVGWTKFGDLALEIQ
Specific function: Unknown
COG id: COG3641
COG function: function code R; Predicted membrane protein, putative toxin regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34720; Mature: 34720
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKQYMMDRMVKISAGMANAVLVTLGVGLLIETIGNLTGIAMLVQIGQVAKSLLAPALG CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGVAFQLGSNTLILFSAMIAATIGGAALKATESGLVLVPGQPISALIAAAAAVWLGKRVL CCEEEEECCCHHHHHHHHHHHHHCCHHEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHH GKTKFDMMVVPVTAVLGGGIVGVAAAAVTTPLINSISQGITASVETSPIATSLVIALVFS CCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH VMLMSPASSAALAIALQLDPVASAAALIGCSAQFVGFTLMAYRQTDPGGLVASFFVTPKV HHHHCCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEEEECCCC QFPNIIKNPRIVVPPFIAAMISAPIATLMFSLQVPYEIAGLGLNSLIAPLQILAVQGLDA CCCHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCHH FLIFTMTGVVLPALITWALYRVTSLVGWTKFGDLALEIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEC >Mature Secondary Structure MEVKQYMMDRMVKISAGMANAVLVTLGVGLLIETIGNLTGIAMLVQIGQVAKSLLAPALG CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGVAFQLGSNTLILFSAMIAATIGGAALKATESGLVLVPGQPISALIAAAAAVWLGKRVL CCEEEEECCCHHHHHHHHHHHHHCCHHEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHH GKTKFDMMVVPVTAVLGGGIVGVAAAAVTTPLINSISQGITASVETSPIATSLVIALVFS CCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH VMLMSPASSAALAIALQLDPVASAAALIGCSAQFVGFTLMAYRQTDPGGLVASFFVTPKV HHHHCCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEEEECCCC QFPNIIKNPRIVVPPFIAAMISAPIATLMFSLQVPYEIAGLGLNSLIAPLQILAVQGLDA CCCHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCHH FLIFTMTGVVLPALITWALYRVTSLVGWTKFGDLALEIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA