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The map label for this gene is recO

Identifier: 229916326

GI number: 229916326

Start: 547400

End: 548149

Strand: Reverse

Name: recO

Synonym: EAT1b_0595

Alternate gene names: 229916326

Gene position: 548149-547400 (Counterclockwise)

Preceding gene: 229916327

Following gene: 229916325

Centisome position: 18.27

GC content: 47.47

Gene sequence:

>750_bases
ATGTTACAAAAAGTCACGGGAATCGTCGTTCGTACCGTAAATTATGGGGAATCGAATAAAGTCGTGACATTGTTTACAGA
GGAACTTGGCAAAGTCGCGATCATGGCACGGGGTGCAAAAAAACCGGGTAGCCGGTTTCATGCCTCGAGCCAGCCGTTTG
TGGAAGGTGTCTATATCTTTCCGTCTAGCCGTGGACTCGCTCAGTTGAAATCATCTGATGTCATGACGTCTTATCCTGAA
ATCCGAAAAGATGTCGAACGGATGGCATATGCGATGTATTGGTTAGAACTCGTTGATCGGTCTGTCGAGGATCGTGTCCA
AAATCGTCCACTATTTCGAATCTTACAGGATGCCTTGCAGGCACTGAATGCAGGCATGGACGCAGATGTCATCACGCACT
ATGTTGAATTACGTATTCTGCATCTGTTAGGTGTCGCCCCAGTCTTGACAGGGTGTGTGCGCTGCGGAGATGTGACGGAT
CCCATGTACTTCTCTGTCGCGTCCGGTGGCTTTTTATGTGCGCGACATCCAGAAGAAGGTGTGATCCTGCTGTCCGAACG
ATTGGCGAAACTACTATACTTGATGAGTAAGCACGAATTGTCTGAGTTTCGGAACGTCCCGCTATCGGATGAGTCCAGAG
TCCTTTTGCGTCAGCTTTTTGATGCATATATGGAATCGTATAGTGGACTACGATTGAAGACGAAGCGAGTACTCGATCAA
ATGATTCGACTTCATCTGAATGAGGATTGA

Upstream 100 bases:

>100_bases
TAAAGTTTATTTAAATCTATGGGTAAAAGTGCAGAAAGACTGGCGTAACAAGATGGGTCAGCTTCGTGACCTCGGTTTCC
GCGACGACGAGTATTGAGCC

Downstream 100 bases:

>100_bases
CTTTTCATAGTGAATTCGATACGATGATGTACGATTAGACAAATGAAATAGCGTGCGCGATGAAGGAAAAAAGTAACTCT
TCCTGTCATGAATGAAGCGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIFPSSRGLAQLKSSDVMTSYPE
IRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTD
PMYFSVASGGFLCARHPEEGVILLSERLAKLLYLMSKHELSEFRNVPLSDESRVLLRQLFDAYMESYSGLRLKTKRVLDQ
MIRLHLNED

Sequences:

>Translated_249_residues
MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIFPSSRGLAQLKSSDVMTSYPE
IRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTD
PMYFSVASGGFLCARHPEEGVILLSERLAKLLYLMSKHELSEFRNVPLSDESRVLLRQLFDAYMESYSGLRLKTKRVLDQ
MIRLHLNED
>Mature_249_residues
MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIFPSSRGLAQLKSSDVMTSYPE
IRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTD
PMYFSVASGGFLCARHPEEGVILLSERLAKLLYLMSKHELSEFRNVPLSDESRVLLRQLFDAYMESYSGLRLKTKRVLDQ
MIRLHLNED

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_EXISA (C4L405)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002884972.1
- GeneID:   7871334
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0595
- OMA:   VMARGAK
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28202; Mature: 28202

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIF
CCCHHHHHEEEEEECCCCCCEEEEEHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
PSSRGLAQLKSSDVMTSYPEIRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQ
ECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTDPMYFSVASGGFLCARHPEEG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCC
VILLSERLAKLLYLMSKHELSEFRNVPLSDESRVLLRQLFDAYMESYSGLRLKTKRVLDQ
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MIRLHLNED
HHHHHCCCC
>Mature Secondary Structure
MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIF
CCCHHHHHEEEEEECCCCCCEEEEEHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
PSSRGLAQLKSSDVMTSYPEIRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQ
ECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTDPMYFSVASGGFLCARHPEEG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCC
VILLSERLAKLLYLMSKHELSEFRNVPLSDESRVLLRQLFDAYMESYSGLRLKTKRVLDQ
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MIRLHLNED
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA