Click here to switch to the map view.

The map label for this gene is glyQ [H]

Identifier: 229916325

GI number: 229916325

Start: 546212

End: 547114

Strand: Reverse

Name: glyQ [H]

Synonym: EAT1b_0594

Alternate gene names: 229916325

Gene position: 547114-546212 (Counterclockwise)

Preceding gene: 229916326

Following gene: 229916324

Centisome position: 18.24

GC content: 47.4

Gene sequence:

>903_bases
ATGAAGCACATGACAGTGCAAGAAATCATTCTCACGCTACAAAACTTTTGGGCGTCAAAAGGTTGTTTGACGATGCAGGC
GTACGATGTGGAAAAAGGAGCCGGGACGATGAACCCGATGACATTCCTCAGAAGCCTTGGGCCAGAACCGTGGAACGTCT
GTTATACCGAGCCGTCACGCCGTCCTGCTGACGGTCGTTACGGGGAAAACCCGAACCGTCTATATCAACACCATCAGTTC
CAAGTCATCATGAAGCCGTCACCGAGTAACATTCAGGAGTTGTACTTAGAGAGTCTTGAATTGATTGGCATCAATCCGCT
CGAGCATGATATCCGTTTCGTCGAAGACAACTGGGAAAACCCGACGTTCGGAGCAGCGGGTCTCGGTTGGGAAGTTTGGT
TGAACGGAATGGAGATCACACAGTTCACGTACTTCCAACAAGTCGGTGGAATCGAGTGTGACCCGATTGCCGTGGAAATC
ACATACGGACTTGAACGTCTCGCTTCATACATTCAGGAAGTAGAAAGTGTATTCGACCTTGTTTGGACAGATGGATTCAA
ATACGGCGATATCTTCTATCAACCTGAATTTGAACACTCGAAATATACGTTCGAACTGTCTGATGTTGATATGTTGTTCA
CGTTATTTGATACGTATGAGAAAGAAGCGAAGCGTGCGCTTGAAGAGAACCTTGTCTTCCCTGCATACGACTACATTTTA
AAATGTTCGCACACGTTCAACTTGTTGGACGCGAAAGGCGCTATTTCTGTGACGGAACGTACAGGCTTCATCCAGCGTGT
CCGGAACATGTCCCGTGCGTGTGCCGCTAAATTTATTGAAGAACGGGAACGCCTTGGATTCCCACTTTTGAAACAAGAGA
AAGCAGGTGACTTGAATGCGTGA

Upstream 100 bases:

>100_bases
TGGGGCAAGTAGGGTGGAACCGCGGGAATCAATCCCGTCCCTATGTGCTAGGCACATAGGGGCGTTTTTTGTCGTTTCAA
TACTATTGGAGGTGTCATTA

Downstream 100 bases:

>100_bases
CCTTCTGTTAGAAATTGGATTAGAGGAACTGCCGGCTCAATACGTCTTGCGTTCAGAGAAGCAGTTGGCGGAACGTGTTG
ACGCGTTCTTAAAAGAGGCG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKHMTVQEIILTLQNFWASKGCLTMQAYDVEKGAGTMNPMTFLRSLGPEPWNVCYTEPSRRPADGRYGENPNRLYQHHQF
QVIMKPSPSNIQELYLESLELIGINPLEHDIRFVEDNWENPTFGAAGLGWEVWLNGMEITQFTYFQQVGGIECDPIAVEI
TYGLERLASYIQEVESVFDLVWTDGFKYGDIFYQPEFEHSKYTFELSDVDMLFTLFDTYEKEAKRALEENLVFPAYDYIL
KCSHTFNLLDAKGAISVTERTGFIQRVRNMSRACAAKFIEERERLGFPLLKQEKAGDLNA

Sequences:

>Translated_300_residues
MKHMTVQEIILTLQNFWASKGCLTMQAYDVEKGAGTMNPMTFLRSLGPEPWNVCYTEPSRRPADGRYGENPNRLYQHHQF
QVIMKPSPSNIQELYLESLELIGINPLEHDIRFVEDNWENPTFGAAGLGWEVWLNGMEITQFTYFQQVGGIECDPIAVEI
TYGLERLASYIQEVESVFDLVWTDGFKYGDIFYQPEFEHSKYTFELSDVDMLFTLFDTYEKEAKRALEENLVFPAYDYIL
KCSHTFNLLDAKGAISVTERTGFIQRVRNMSRACAAKFIEERERLGFPLLKQEKAGDLNA
>Mature_300_residues
MKHMTVQEIILTLQNFWASKGCLTMQAYDVEKGAGTMNPMTFLRSLGPEPWNVCYTEPSRRPADGRYGENPNRLYQHHQF
QVIMKPSPSNIQELYLESLELIGINPLEHDIRFVEDNWENPTFGAAGLGWEVWLNGMEITQFTYFQQVGGIECDPIAVEI
TYGLERLASYIQEVESVFDLVWTDGFKYGDIFYQPEFEHSKYTFELSDVDMLFTLFDTYEKEAKRALEENLVFPAYDYIL
KCSHTFNLLDAKGAISVTERTGFIQRVRNMSRACAAKFIEERERLGFPLLKQEKAGDLNA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=296, Percent_Identity=63.1756756756757, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34675; Mature: 34675

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHMTVQEIILTLQNFWASKGCLTMQAYDVEKGAGTMNPMTFLRSLGPEPWNVCYTEPSR
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEECCCCC
RPADGRYGENPNRLYQHHQFQVIMKPSPSNIQELYLESLELIGINPLEHDIRFVEDNWEN
CCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCC
PTFGAAGLGWEVWLNGMEITQFTYFQQVGGIECDPIAVEITYGLERLASYIQEVESVFDL
CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
VWTDGFKYGDIFYQPEFEHSKYTFELSDVDMLFTLFDTYEKEAKRALEENLVFPAYDYIL
HHCCCCEECCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KCSHTFNLLDAKGAISVTERTGFIQRVRNMSRACAAKFIEERERLGFPLLKQEKAGDLNA
HHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MKHMTVQEIILTLQNFWASKGCLTMQAYDVEKGAGTMNPMTFLRSLGPEPWNVCYTEPSR
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEECCCCC
RPADGRYGENPNRLYQHHQFQVIMKPSPSNIQELYLESLELIGINPLEHDIRFVEDNWEN
CCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCC
PTFGAAGLGWEVWLNGMEITQFTYFQQVGGIECDPIAVEITYGLERLASYIQEVESVFDL
CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
VWTDGFKYGDIFYQPEFEHSKYTFELSDVDMLFTLFDTYEKEAKRALEENLVFPAYDYIL
HHCCCCEECCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KCSHTFNLLDAKGAISVTERTGFIQRVRNMSRACAAKFIEERERLGFPLLKQEKAGDLNA
HHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA