| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqhL [H]
Identifier: 229916264
GI number: 229916264
Start: 485250
End: 485630
Strand: Direct
Name: yqhL [H]
Synonym: EAT1b_0533
Alternate gene names: 229916264
Gene position: 485250-485630 (Clockwise)
Preceding gene: 229916261
Following gene: 229916277
Centisome position: 16.18
GC content: 46.46
Gene sequence:
>381_bases ATGGGACTCGAAACAATCCTCGTCATCCTCCTATGGGTTGCCTTGATCGCCTACATCGTATGGCGTTTCATGCCAGCTCG CGGGTTGAAAAAAATGAAACAAGAAGAATTCCGCGCCTCACTCCGTAAAGGTCAGTTGATTGACGTGCGTGAACCGAACG AATACAAAGGTGGACATATCGTTGGTGCTCGGAATATCCCGGTCGGCCAAATGAAACTACGCATGAAAGAACTGCGCAAA GATCAGCCGATTTTGATTTACTGCCAAGGTAGTTCACGTTCAAACCAGGCCGCTAAACTCCTGATGAAGAACGGATACAA CAACATCTACATGCTCGAAGGCGGTTTCAAGAACTGGAAGGGTAAGATTAAAAAAGCATAA
Upstream 100 bases:
>100_bases GAAAGGGAAAGCCCCGATTGATTGAGTCAATCATTGTCTCATGACCTTAAATTCATTATAATGAGATATGGTAACTTTGA AAGAGAAGGGAAGAACATCT
Downstream 100 bases:
>100_bases AAAAACGGGCGGGTCGATTCAATCATCGACTCGCCCATTTTTATTTTACAGATGACGCCTCACGACGCTCATATTTTAAG ACCGGTTTACGGGCAGCGAG
Product: Rhodanese domain protein
Products: H+; Sulfite; Thiocyanate [C]
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MGLETILVILLWVALIAYIVWRFMPARGLKKMKQEEFRASLRKGQLIDVREPNEYKGGHIVGARNIPVGQMKLRMKELRK DQPILIYCQGSSRSNQAAKLLMKNGYNNIYMLEGGFKNWKGKIKKA
Sequences:
>Translated_126_residues MGLETILVILLWVALIAYIVWRFMPARGLKKMKQEEFRASLRKGQLIDVREPNEYKGGHIVGARNIPVGQMKLRMKELRK DQPILIYCQGSSRSNQAAKLLMKNGYNNIYMLEGGFKNWKGKIKKA >Mature_125_residues GLETILVILLWVALIAYIVWRFMPARGLKKMKQEEFRASLRKGQLIDVREPNEYKGGHIVGARNIPVGQMKLRMKELRKD QPILIYCQGSSRSNQAAKLLMKNGYNNIYMLEGGFKNWKGKIKKA
Specific function: Catalyzes, Although With Low Efficiency, The Sulfur Transfer Reaction From Thiosulfate To Cyanide. The Relatively Low Affinity Of Glpe For Both Thiosulfate And Cyanide Suggests That These Compounds Are Not The Physiological Substrates. Thioredoxin 1 Or Re
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: 2.8.1.1 [C]
Molecular weight: Translated: 14538; Mature: 14406
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLETILVILLWVALIAYIVWRFMPARGLKKMKQEEFRASLRKGQLIDVREPNEYKGGHI CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEE VGARNIPVGQMKLRMKELRKDQPILIYCQGSSRSNQAAKLLMKNGYNNIYMLEGGFKNWK EECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCC GKIKKA CCCCCC >Mature Secondary Structure GLETILVILLWVALIAYIVWRFMPARGLKKMKQEEFRASLRKGQLIDVREPNEYKGGHI CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEE VGARNIPVGQMKLRMKELRKDQPILIYCQGSSRSNQAAKLLMKNGYNNIYMLEGGFKNWK EECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCC GKIKKA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cyanide; Thiosulfate [C]
Specific reaction: Cyanide + Thiosulfate --> H+ + Sulfite + Thiocyanate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]