| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqhQ [H]
Identifier: 229916260
GI number: 229916260
Start: 482566
End: 483507
Strand: Direct
Name: yqhQ [H]
Synonym: EAT1b_0529
Alternate gene names: 229916260
Gene position: 482566-483507 (Clockwise)
Preceding gene: 229916244
Following gene: 229916261
Centisome position: 16.09
GC content: 48.41
Gene sequence:
>942_bases ATGAATTCTAAACCAACCATCCCAGTCGGGGGACAGGCGCTCGTGGAAGGCGTCATGTTTCAAGGCCGCTCTGAAAGCGC ATCTGCCATCCGGCGAAAAGATGGCTCGATCGAAACATTCGAGCAAGCGCGCATTCTTGTCCCTTGGGTCCAATCGTTAA AAAAAGTACCGTTCTTAAGAGGGATTGTCGCGCTTTACGAATCGTTAAAGAACGGTTCTGCACATATGAACTTTGCGAGC GATCGATACGATGTCGACCCGAGTGAAGATACGAACACGAGCGAAGACCAAAAACAGAGCATCTGGATGATTGCCTTCAT CGCAATCGTCGGTGTCATCTCATACGTGTTTGGTAAATTGATTTTCAATGTGACGCCCGCACTGCTCGCGGCTATGTTTC AAGACGTGCCTTTATTTTCCGGACATGTGATTCAAAACCTCCTTGAAGGGGGAATAAAATTAGTATTGTTACTCAGCTAC CTTTACTTGATATCATTGACGCCACTGATCAAGCGCGTCTTCCAATATCACGGCGCTGAGCATAAAGTCATCAATTGCTA TGAGTCCGGTCGTCCGGTCACGGTTGAACAAGTACGCCAAAGCTCGCGATTGCATTATCGCTGTGGCTCGAGCTTCATTT TATTCACCGTCTTCGTCGGGATTGGCGTTTACATGATTGTGCCAATCGACCCGCTCTGGTTGCGACTCGTCAGCCGAATC GCGCTATTGCCGGTCGTCATCGGAATCTCATTTGAAGTCCTTCAGTTTACCAATCGTTTCCGCGACCATCGCTTTCTGTC AATCCTCGGCAAACCGGGCCTGTCGCTCCAATTATTGACGACACGAGAGCCGAATGATGAGCAGATTCAAGTCGCGATTG AAGCATTTGAGACATGGGAACGAAAAGAGTTAGGAGAATCGGTCATTCATAGAGAGGGATAA
Upstream 100 bases:
>100_bases AATTTATCGAAAGAACGTGAATCGAGCCTTCTGCCCTTTCGTTTTTTTTACAAATCACGGTATAATTCAAGTACAACATT TGAAGAATCGAGGAAAGTGA
Downstream 100 bases:
>100_bases GAGGAGGAAGCACCATGATCAGACAAAGAGTCGGTTCGATCGCTGCAACAATCGTGTTTATCCTTGGCTTCATCGGGGTC GGGCATATGCTTGCCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG
Sequences:
>Translated_313_residues MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG >Mature_313_residues MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 35242; Mature: 35242
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLR CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH GIVALYESLKNGSAHMNFASDRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSYLYLISLTPLIKRVFQYHGAE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI CCEEEHHHCCCCEEHHHHHHHCCEEECCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHH ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH RKELGESVIHREG HHHHHHHHHCCCC >Mature Secondary Structure MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLR CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH GIVALYESLKNGSAHMNFASDRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSYLYLISLTPLIKRVFQYHGAE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI CCEEEHHHCCCCEEHHHHHHHCCEEECCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHH ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH RKELGESVIHREG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]