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The map label for this gene is deoB [H]

Identifier: 229916182

GI number: 229916182

Start: 412699

End: 413865

Strand: Reverse

Name: deoB [H]

Synonym: EAT1b_0451

Alternate gene names: 229916182

Gene position: 413865-412699 (Counterclockwise)

Preceding gene: 229916183

Following gene: 229916181

Centisome position: 13.8

GC content: 52.27

Gene sequence:

>1167_bases
GTGAAGAAGTTTAAACGTATTTTCTTAGTCGTCATGGACTCGGTCGGGATCGGTGAAGCACCAGATGCCGAACAGTTCGG
TGACAAAGGGGCCGACACGCTCGGGCATATCGCGCGTGAACATAACGGATTGAACATGCCGAACATGGGTAAACTCGGAC
TTTCGAACATCAAGCCGATTCAAGGCATCGATGCATCGGACGCACCGAGTGCGTATGGTCGCATGGAAGAAATCTCAGCT
GGTAAGGATACGATGACGGGCCATTGGGAAATCATGGGACTCCATATCGATACACCATTCCGCGTGTTTGAGGAGTTTCC
AGATGATTTGATTCACCGTCTTGAAGAGTTCAGCGGACGTAAAATCATCGGAAACAAACCGGCGTCCGGAACAGAAATCT
TGGACGAACTCGGTGAAGAGCATGTCAAGACGGGCGCCCTCATCGTTTATACATCTGCCGACTCGGTTCTTCAAATCGCA
GCACACGAAGAGATTGTGCCGATTGATGAATTGTATCGCATCTGCGAATACGCACGTGAAATCACACGTGAAGACCCGTA
CATGCTCGGACGAATCATTGCTCGCCCGTTCCTTGGGACACCAGGAGCATGGGTCCGTACGGCGAACCGTCACGACTACG
CACTGAAACCATTCGGCAAGACCGTCATGAACACGCTCGAGGAAGCTGGGAAAGACGTCATCGCATTAGGGAAGATCAGC
GATATTTACGATGGTGAAGGCGTGACAAAAGCGGTCCGCACGAAATCGAACATGGACGGCATGGACAAATTGGTCGAGTC
GCTCGAGGAAGACTTCGAAGGACTCTGCTTCTTGAACTTGGTCGACTTCGACGCGTTGTTCGGTCATCGCCGTGACCCGG
AAGGTTATGCGGTCGCGCTTGAAGAGTACGACGCTCGCCTACCGGAAGTGATGGAGCGTCTTCGTGAAGATGACCTGCTC
ATCATCACGGCTGATCACGGAAATGATCCTGTTCATGCTGGGACAGACCACACGCGTGAATACGTTCCGCTCATCGTTCA
TCACAACGGAGCGAAGGCAGTCGATTTGGGTATTCGCGGAACATTCGCGGACATCGGGGCGACGGTCGCTGACAACTTTG
ACGTCGCGGCACCATCACACGGAAAGAGTTTCTTAAACGAAATTTGA

Upstream 100 bases:

>100_bases
CGACGACGCAAGTGTATACACACGTCAACAAATCGCGTCTACATGATGTGTATCGTAAGCATCACCCTCGTGCCTAGACA
CCGAAAAGGAGGAATTTTTT

Downstream 100 bases:

>100_bases
GGAGGCAATATTCATGGTAAATTGGAACGAAACAAAAGCGTTTTTGCAGGAGCGTATGGGCAGTACACCAGAAATCGGAC
TCATTCTCGGGTCAGGACTC

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKKFKRIFLVVMDSVGIGEAPDAEQFGDKGADTLGHIAREHNGLNMPNMGKLGLSNIKPIQGIDASDAPSAYGRMEEISA
GKDTMTGHWEIMGLHIDTPFRVFEEFPDDLIHRLEEFSGRKIIGNKPASGTEILDELGEEHVKTGALIVYTSADSVLQIA
AHEEIVPIDELYRICEYAREITREDPYMLGRIIARPFLGTPGAWVRTANRHDYALKPFGKTVMNTLEEAGKDVIALGKIS
DIYDGEGVTKAVRTKSNMDGMDKLVESLEEDFEGLCFLNLVDFDALFGHRRDPEGYAVALEEYDARLPEVMERLREDDLL
IITADHGNDPVHAGTDHTREYVPLIVHHNGAKAVDLGIRGTFADIGATVADNFDVAAPSHGKSFLNEI

Sequences:

>Translated_388_residues
MKKFKRIFLVVMDSVGIGEAPDAEQFGDKGADTLGHIAREHNGLNMPNMGKLGLSNIKPIQGIDASDAPSAYGRMEEISA
GKDTMTGHWEIMGLHIDTPFRVFEEFPDDLIHRLEEFSGRKIIGNKPASGTEILDELGEEHVKTGALIVYTSADSVLQIA
AHEEIVPIDELYRICEYAREITREDPYMLGRIIARPFLGTPGAWVRTANRHDYALKPFGKTVMNTLEEAGKDVIALGKIS
DIYDGEGVTKAVRTKSNMDGMDKLVESLEEDFEGLCFLNLVDFDALFGHRRDPEGYAVALEEYDARLPEVMERLREDDLL
IITADHGNDPVHAGTDHTREYVPLIVHHNGAKAVDLGIRGTFADIGATVADNFDVAAPSHGKSFLNEI
>Mature_388_residues
MKKFKRIFLVVMDSVGIGEAPDAEQFGDKGADTLGHIAREHNGLNMPNMGKLGLSNIKPIQGIDASDAPSAYGRMEEISA
GKDTMTGHWEIMGLHIDTPFRVFEEFPDDLIHRLEEFSGRKIIGNKPASGTEILDELGEEHVKTGALIVYTSADSVLQIA
AHEEIVPIDELYRICEYAREITREDPYMLGRIIARPFLGTPGAWVRTANRHDYALKPFGKTVMNTLEEAGKDVIALGKIS
DIYDGEGVTKAVRTKSNMDGMDKLVESLEEDFEGLCFLNLVDFDALFGHRRDPEGYAVALEEYDARLPEVMERLREDDLL
IITADHGNDPVHAGTDHTREYVPLIVHHNGAKAVDLGIRGTFADIGATVADNFDVAAPSHGKSFLNEI

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose [H]

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1790843, Length=407, Percent_Identity=46.1916461916462, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI1789781, Length=427, Percent_Identity=27.4004683840749, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: =5.4.2.7 [H]

Molecular weight: Translated: 42845; Mature: 42845

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKRIFLVVMDSVGIGEAPDAEQFGDKGADTLGHIAREHNGLNMPNMGKLGLSNIKPI
CCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
QGIDASDAPSAYGRMEEISAGKDTMTGHWEIMGLHIDTPFRVFEEFPDDLIHRLEEFSGR
CCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHHHHHCCC
KIIGNKPASGTEILDELGEEHVKTGALIVYTSADSVLQIAAHEEIVPIDELYRICEYARE
EEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH
ITREDPYMLGRIIARPFLGTPGAWVRTANRHDYALKPFGKTVMNTLEEAGKDVIALGKIS
HCCCCHHHHHHHHHCCCCCCCCHHEEECCCCCCEECHHHHHHHHHHHHCCCCEEEECCCC
DIYDGEGVTKAVRTKSNMDGMDKLVESLEEDFEGLCFLNLVDFDALFGHRRDPEGYAVAL
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCEEEH
EEYDARLPEVMERLREDDLLIITADHGNDPVHAGTDHTREYVPLIVHHNGAKAVDLGIRG
HHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC
TFADIGATVADNFDVAAPSHGKSFLNEI
CHHHHCHHHHCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKKFKRIFLVVMDSVGIGEAPDAEQFGDKGADTLGHIAREHNGLNMPNMGKLGLSNIKPI
CCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
QGIDASDAPSAYGRMEEISAGKDTMTGHWEIMGLHIDTPFRVFEEFPDDLIHRLEEFSGR
CCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHHHHHCCC
KIIGNKPASGTEILDELGEEHVKTGALIVYTSADSVLQIAAHEEIVPIDELYRICEYARE
EEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH
ITREDPYMLGRIIARPFLGTPGAWVRTANRHDYALKPFGKTVMNTLEEAGKDVIALGKIS
HCCCCHHHHHHHHHCCCCCCCCHHEEECCCCCCEECHHHHHHHHHHHHCCCCEEEECCCC
DIYDGEGVTKAVRTKSNMDGMDKLVESLEEDFEGLCFLNLVDFDALFGHRRDPEGYAVAL
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCEEEH
EEYDARLPEVMERLREDDLLIITADHGNDPVHAGTDHTREYVPLIVHHNGAKAVDLGIRG
HHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC
TFADIGATVADNFDVAAPSHGKSFLNEI
CHHHHCHHHHCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA