| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229915852
Identifier: 229915852
GI number: 229915852
Start: 94508
End: 95707
Strand: Reverse
Name: 229915852
Synonym: EAT1b_0119
Alternate gene names: NA
Gene position: 95707-94508 (Counterclockwise)
Preceding gene: 229915855
Following gene: 229915832
Centisome position: 3.19
GC content: 46.17
Gene sequence:
>1200_bases ATGTCCATCCATATCGCCGTTGTCGGCTCACCATCGTTTATACAACAGGTACGGAACGGTTCTTCTTTATCCAATGTTCG AATCGAGGGATTTCCTTATGATGACCCGCGAGAAGCGAAAGACATCGCTACAAAACTCCTATTTTTTGACGGAGTGTTCT TCTCCGGTTCATTCCCTTATACGTATGCGATGGAGGAAGCGAACCGTCCATTTGCCCATCACGTCGTTCAAGATGATGTC GTGTTATTGACGTCACTTTTATACGTGACATTGAAACAACAGCTCCGAATCGAAGAGCTCTCCATCGATCTCGTTGATGC GTCACGACTTGAATCAATTTTAGCATCGTTTCCAAGCCACATGTCGCCACCGCAAGTGAAAGAAGTTAGTCCGTATATGA ATTTCGAAGAGTTGCTTTCGTTTCATGAGCAACTTCAACGAAATGGGACGACTCGATTCGCCTTGACGAGTGTCGAGCGA GTTCATCGACACTTAGTGGAAAATGGTTTTGCTAGTCAACTCATGATTGAGCCAGAAGAGAGAATTCTCCACCACTTCCA TGATTTTATTCAACAGATTCGATTGAACAAATCAGACCAGTCCCAACTCGCCGTGCTCTTCTACTCGGATGCCAGTGAAG ATACGCTCAACCATGTGACAACACATCATTATTTCGGTGGTAAATTGATGGAGACCACTCAAGACGGTATCGTCCTATTA TCGAGTAAAGGAAAGATTGACTCCGCCATGTCAAACGGTTCCATCTTGGCAGAGAACATTTCTGGTCATGTAGGGATCGG GTATGGTTCCGATTATCAACGCGCCATTGAGCATGCCGAACTTGCCCTTCATACGACAAACAATGCCGCTATACGCATCG TCGACGATTCAAAACGAATGACGTTCACCGACCAACCGGCACCGATTCATTTCCGCGTCACGCAAACGCGTGTCTATGAC ATGATGAAACAGACGGGTATGAGCCCGACCAATATCGAAAAGCTCATTCATTTTTCAACGGACCATCTCGAGTTTACAGC GAAAGAGCTGACCGACCATTTAAACGTGACACGTCGCACGACAGAGCGACTCATCAAAAAATTGGTTGATGCAAAACTCG TTCATCCGATTGGCGAAGAGATGAGCTACAGCCAAGGTCGTCCGCGCACCGTCTATAAATTTCAATTCCCAGTCGATTGA
Upstream 100 bases:
>100_bases TTCTATTTTTTGAATATTCACGTTCATCACTCCTTTACTTCAACTGCTCTTTCCTCTATATTGTCGTTATATAGTCGCTA AATTGCAAGGGGGATTTTCA
Downstream 100 bases:
>100_bases CGACCGGGAATCGTTTTATTGAGCCGCTTGTTCCGCAACAGGTTCCTCCTGTTGGATGACCGCCATGCGCTCAATCGTAT ATCCCGTGAAGGCATATACA
Product: transcriptional regulator domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSIHIAVVGSPSFIQQVRNGSSLSNVRIEGFPYDDPREAKDIATKLLFFDGVFFSGSFPYTYAMEEANRPFAHHVVQDDV VLLTSLLYVTLKQQLRIEELSIDLVDASRLESILASFPSHMSPPQVKEVSPYMNFEELLSFHEQLQRNGTTRFALTSVER VHRHLVENGFASQLMIEPEERILHHFHDFIQQIRLNKSDQSQLAVLFYSDASEDTLNHVTTHHYFGGKLMETTQDGIVLL SSKGKIDSAMSNGSILAENISGHVGIGYGSDYQRAIEHAELALHTTNNAAIRIVDDSKRMTFTDQPAPIHFRVTQTRVYD MMKQTGMSPTNIEKLIHFSTDHLEFTAKELTDHLNVTRRTTERLIKKLVDAKLVHPIGEEMSYSQGRPRTVYKFQFPVD
Sequences:
>Translated_399_residues MSIHIAVVGSPSFIQQVRNGSSLSNVRIEGFPYDDPREAKDIATKLLFFDGVFFSGSFPYTYAMEEANRPFAHHVVQDDV VLLTSLLYVTLKQQLRIEELSIDLVDASRLESILASFPSHMSPPQVKEVSPYMNFEELLSFHEQLQRNGTTRFALTSVER VHRHLVENGFASQLMIEPEERILHHFHDFIQQIRLNKSDQSQLAVLFYSDASEDTLNHVTTHHYFGGKLMETTQDGIVLL SSKGKIDSAMSNGSILAENISGHVGIGYGSDYQRAIEHAELALHTTNNAAIRIVDDSKRMTFTDQPAPIHFRVTQTRVYD MMKQTGMSPTNIEKLIHFSTDHLEFTAKELTDHLNVTRRTTERLIKKLVDAKLVHPIGEEMSYSQGRPRTVYKFQFPVD >Mature_398_residues SIHIAVVGSPSFIQQVRNGSSLSNVRIEGFPYDDPREAKDIATKLLFFDGVFFSGSFPYTYAMEEANRPFAHHVVQDDVV LLTSLLYVTLKQQLRIEELSIDLVDASRLESILASFPSHMSPPQVKEVSPYMNFEELLSFHEQLQRNGTTRFALTSVERV HRHLVENGFASQLMIEPEERILHHFHDFIQQIRLNKSDQSQLAVLFYSDASEDTLNHVTTHHYFGGKLMETTQDGIVLLS SKGKIDSAMSNGSILAENISGHVGIGYGSDYQRAIEHAELALHTTNNAAIRIVDDSKRMTFTDQPAPIHFRVTQTRVYDM MKQTGMSPTNIEKLIHFSTDHLEFTAKELTDHLNVTRRTTERLIKKLVDAKLVHPIGEEMSYSQGRPRTVYKFQFPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45367; Mature: 45236
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHIAVVGSPSFIQQVRNGSSLSNVRIEGFPYDDPREAKDIATKLLFFDGVFFSGSFPY CEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEECCCCCE TYAMEEANRPFAHHVVQDDVVLLTSLLYVTLKQQLRIEELSIDLVDASRLESILASFPSH EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCC MSPPQVKEVSPYMNFEELLSFHEQLQRNGTTRFALTSVERVHRHLVENGFASQLMIEPEE CCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHEEECHHH RILHHFHDFIQQIRLNKSDQSQLAVLFYSDASEDTLNHVTTHHYFGGKLMETTQDGIVLL HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHEECCCEEEEECCCCEEEE SSKGKIDSAMSNGSILAENISGHVGIGYGSDYQRAIEHAELALHTTNNAAIRIVDDSKRM ECCCCCHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHEEEEECCCCEEEEEECCCCE TFTDQPAPIHFRVTQTRVYDMMKQTGMSPTNIEKLIHFSTDHLEFTAKELTDHLNVTRRT EECCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TERLIKKLVDAKLVHPIGEEMSYSQGRPRTVYKFQFPVD HHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCC >Mature Secondary Structure SIHIAVVGSPSFIQQVRNGSSLSNVRIEGFPYDDPREAKDIATKLLFFDGVFFSGSFPY EEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEECCCCCE TYAMEEANRPFAHHVVQDDVVLLTSLLYVTLKQQLRIEELSIDLVDASRLESILASFPSH EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCC MSPPQVKEVSPYMNFEELLSFHEQLQRNGTTRFALTSVERVHRHLVENGFASQLMIEPEE CCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHEEECHHH RILHHFHDFIQQIRLNKSDQSQLAVLFYSDASEDTLNHVTTHHYFGGKLMETTQDGIVLL HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHEECCCEEEEECCCCEEEE SSKGKIDSAMSNGSILAENISGHVGIGYGSDYQRAIEHAELALHTTNNAAIRIVDDSKRM ECCCCCHHHCCCCCEEEECCCCCEECCCCCHHHHHHHHHHEEEEECCCCEEEEEECCCCE TFTDQPAPIHFRVTQTRVYDMMKQTGMSPTNIEKLIHFSTDHLEFTAKELTDHLNVTRRT EECCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TERLIKKLVDAKLVHPIGEEMSYSQGRPRTVYKFQFPVD HHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA