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The map label for this gene is ypmR [H]

Identifier: 229915855

GI number: 229915855

Start: 97606

End: 98355

Strand: Reverse

Name: ypmR [H]

Synonym: EAT1b_0122

Alternate gene names: 229915855

Gene position: 98355-97606 (Counterclockwise)

Preceding gene: 229915861

Following gene: 229915852

Centisome position: 3.28

GC content: 48.0

Gene sequence:

>750_bases
ATGAAACAGTCGAAATGGTATGCATTTTTAAGTGGCGCCGTTCTTTTAACGGGAATCGCCGTCTACGGTCTATGGATCGG
CTATCAAGATATCGTCAATCCGCCGGAGCGAACACTTTCCGTCTCCGAAGATGAACGTCCCGTGCCAGAAGGAGACGTGT
ACGTCGCATTAGGCGATTCGTTGACACGCGGTGTGGGGTCAACATCAGGCGCAGGATATGTACAGCCTGTCAGCGCTGCT
CTTGAAGAAGAAGGCGTACGTACGCAAAACCTTGCCGTGTCTGGGGCACGAACAGAAGATTTACTCACACAACTCGAGCA
ACCTGAAGTGCGTCGGACCATCGAGAACGCACGATATATCACGTTGACCATCGGTGGAAACGATTTGTTCAACCGTGGGG
AAAACGTCGATAACTTCGAATCCGTCGATATTCAACAAGTGGTCACGGATGCGAAGACGAATTTAGAAACGATTTTCACT
GAAATTCGTTCACTCAACGATTCGGCAACCATCGTGTATATCGGTCTATACAATCCGTTTCAAAATGATGAGAATGGACA
AGCATTCAATCAGCTCATCCTCGATTGGAACGCATCAGCGAAACAATTGGCGAATGCGCAGAATATCGATGTGATCGACC
CGTTCGCCTACATCTCTGACTTATCAAGAGATTTAGCGACCGACCAGTTCCACCCAAGTGACCGTACGTATGAGAAATTC
GCGAATGATGTACTCTTCGTTCTCGAATAA

Upstream 100 bases:

>100_bases
ATTCTATCGGACAAAAGCGAATCTGTCCTATTCGAACATTCACATAGGGCACATCCATTTATATTTGATATGATGTTTAT
ATAGAAAGCGAGGTCAGCCC

Downstream 100 bases:

>100_bases
TCAAAATCCTCGTCAGCTTGACGAGGATTTTTACTTCTCATATCGAACAATCCACTGTTCCCCTTGTTTCATCATGCCCG
TCCCGATCCAACCAGTTTGG

Product: lipolytic protein G-D-S-L family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKQSKWYAFLSGAVLLTGIAVYGLWIGYQDIVNPPERTLSVSEDERPVPEGDVYVALGDSLTRGVGSTSGAGYVQPVSAA
LEEEGVRTQNLAVSGARTEDLLTQLEQPEVRRTIENARYITLTIGGNDLFNRGENVDNFESVDIQQVVTDAKTNLETIFT
EIRSLNDSATIVYIGLYNPFQNDENGQAFNQLILDWNASAKQLANAQNIDVIDPFAYISDLSRDLATDQFHPSDRTYEKF
ANDVLFVLE

Sequences:

>Translated_249_residues
MKQSKWYAFLSGAVLLTGIAVYGLWIGYQDIVNPPERTLSVSEDERPVPEGDVYVALGDSLTRGVGSTSGAGYVQPVSAA
LEEEGVRTQNLAVSGARTEDLLTQLEQPEVRRTIENARYITLTIGGNDLFNRGENVDNFESVDIQQVVTDAKTNLETIFT
EIRSLNDSATIVYIGLYNPFQNDENGQAFNQLILDWNASAKQLANAQNIDVIDPFAYISDLSRDLATDQFHPSDRTYEKF
ANDVLFVLE
>Mature_249_residues
MKQSKWYAFLSGAVLLTGIAVYGLWIGYQDIVNPPERTLSVSEDERPVPEGDVYVALGDSLTRGVGSTSGAGYVQPVSAA
LEEEGVRTQNLAVSGARTEDLLTQLEQPEVRRTIENARYITLTIGGNDLFNRGENVDNFESVDIQQVVTDAKTNLETIFT
EIRSLNDSATIVYIGLYNPFQNDENGQAFNQLILDWNASAKQLANAQNIDVIDPFAYISDLSRDLATDQFHPSDRTYEKF
ANDVLFVLE

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 27581; Mature: 27581

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSKWYAFLSGAVLLTGIAVYGLWIGYQDIVNPPERTLSVSEDERPVPEGDVYVALGDS
CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCEECCCCCCCCCCCCEEEEECCH
LTRGVGSTSGAGYVQPVSAALEEEGVRTQNLAVSGARTEDLLTQLEQPEVRRTIENARYI
HHHCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHCCCHHHHHHHCCCEEE
TLTIGGNDLFNRGENVDNFESVDIQQVVTDAKTNLETIFTEIRSLNDSATIVYIGLYNPF
EEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
QNDENGQAFNQLILDWNASAKQLANAQNIDVIDPFAYISDLSRDLATDQFHPSDRTYEKF
CCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
ANDVLFVLE
CCCEEEEEC
>Mature Secondary Structure
MKQSKWYAFLSGAVLLTGIAVYGLWIGYQDIVNPPERTLSVSEDERPVPEGDVYVALGDS
CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCEECCCCCCCCCCCCEEEEECCH
LTRGVGSTSGAGYVQPVSAALEEEGVRTQNLAVSGARTEDLLTQLEQPEVRRTIENARYI
HHHCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHCCCHHHHHHHCCCEEE
TLTIGGNDLFNRGENVDNFESVDIQQVVTDAKTNLETIFTEIRSLNDSATIVYIGLYNPF
EEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
QNDENGQAFNQLILDWNASAKQLANAQNIDVIDPFAYISDLSRDLATDQFHPSDRTYEKF
CCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
ANDVLFVLE
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]