Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229915832

Identifier: 229915832

GI number: 229915832

Start: 74491

End: 74991

Strand: Reverse

Name: 229915832

Synonym: EAT1b_0099

Alternate gene names: NA

Gene position: 74991-74491 (Counterclockwise)

Preceding gene: 229915852

Following gene: 229915831

Centisome position: 2.5

GC content: 46.71

Gene sequence:

>501_bases
ATGAAAATGCGTAGTCGTGTCATGGTTTATTTATTGATTCCCATCCTCATCTTTATTGGTATACTGATTACCCCACCTTC
CGAGGAATCGCTCAAGCTTGCGACGATGACCGTCGTCAGCATCCAGGAGATGATTCCTTACGAAAAAGAGTATACGGCAC
AGAAAGTGCTAGAAGAACGATCAGTGGACGACAAATCAGCCATCATCGAAGAATGGCGTCTCGAGCAAGGAGCGAGAACG
TCTTATAGTTATGTGCTCAGACTGAGAGGATTTTACCATGTGACACAGATTGATGCAGGCGCGGCCAACACGAGATCGGA
CGGCTATTACGCGATGCAGGCGCATAGCCCTATCTTTGAGACGGACAAGCCTGTGTCCACGAACTATCCGATTGTCGTGT
TCAGTTCGGAACAACGTCTTGTTATCGGACAGATGGACGTCCGAGTCATTTATGAAGAGGACGATCAATTGAAGAAATGG
TTCGTATTGGAGGATGAATAA

Upstream 100 bases:

>100_bases
AAACTTGAAGAAATGAATCGGTTTTTGAGATTCCAGCGTTCTTTTGAAGGGAACTGATTCTCTTATGCAGAAATAGTTTA
CAGTCTGAAAAGGTAAGGTG

Downstream 100 bases:

>100_bases
GAGTAGATGAGCAGCTTAACGATTGATAGCAATCTAAATATGAAACGCATCATGATCATCGGTTCTGGTGGTGCGGGGAA
ATCCACACTCGCCCGTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKMRSRVMVYLLIPILIFIGILITPPSEESLKLATMTVVSIQEMIPYEKEYTAQKVLEERSVDDKSAIIEEWRLEQGART
SYSYVLRLRGFYHVTQIDAGAANTRSDGYYAMQAHSPIFETDKPVSTNYPIVVFSSEQRLVIGQMDVRVIYEEDDQLKKW
FVLEDE

Sequences:

>Translated_166_residues
MKMRSRVMVYLLIPILIFIGILITPPSEESLKLATMTVVSIQEMIPYEKEYTAQKVLEERSVDDKSAIIEEWRLEQGART
SYSYVLRLRGFYHVTQIDAGAANTRSDGYYAMQAHSPIFETDKPVSTNYPIVVFSSEQRLVIGQMDVRVIYEEDDQLKKW
FVLEDE
>Mature_166_residues
MKMRSRVMVYLLIPILIFIGILITPPSEESLKLATMTVVSIQEMIPYEKEYTAQKVLEERSVDDKSAIIEEWRLEQGART
SYSYVLRLRGFYHVTQIDAGAANTRSDGYYAMQAHSPIFETDKPVSTNYPIVVFSSEQRLVIGQMDVRVIYEEDDQLKKW
FVLEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19252; Mature: 19252

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRSRVMVYLLIPILIFIGILITPPSEESLKLATMTVVSIQEMIPYEKEYTAQKVLEER
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHC
SVDDKSAIIEEWRLEQGARTSYSYVLRLRGFYHVTQIDAGAANTRSDGYYAMQAHSPIFE
CCCHHHHHHHHHHHCCCCCCHHHHHEEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
TDKPVSTNYPIVVFSSEQRLVIGQMDVRVIYEEDDQLKKWFVLEDE
CCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MKMRSRVMVYLLIPILIFIGILITPPSEESLKLATMTVVSIQEMIPYEKEYTAQKVLEER
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHC
SVDDKSAIIEEWRLEQGARTSYSYVLRLRGFYHVTQIDAGAANTRSDGYYAMQAHSPIFE
CCCHHHHHHHHHHHCCCCCCHHHHHEEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
TDKPVSTNYPIVVFSSEQRLVIGQMDVRVIYEEDDQLKKWFVLEDE
CCCCCCCCCCEEEECCCCEEEEEEEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA