Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is yafQ [C]

Identifier: 229587241

GI number: 229587241

Start: 1257602

End: 1257745

Strand: Direct

Name: yafQ [C]

Synonym: RAF_ORF1231

Alternate gene names: 229587241

Gene position: 1257602-1257745 (Clockwise)

Preceding gene: 229587240

Following gene: 229587242

Centisome position: 98.36

GC content: 31.94

Gene sequence:

>144_bases
ATGAGAGATCATGCCCTTATAGGTAATTGGAAAGATTGTAGAGATTGTCATATTAAACCGGATTTAGTATTAATTTATAG
AAAACCCGATGCTGACACATTGGAGTTAATAAAATTAGGTTCACACAGTACACTTGGTTTTTAA

Upstream 100 bases:

>100_bases
GATTAAACGTACTGCACAGTTTAAACGTGGAATAAATTTGGATGATATTTTACTGAAAGCAGTTAGATACTTAGTTGCTG
ATATAACATGACCTATACAT

Downstream 100 bases:

>100_bases
TTATTTTGAAATGAACCGGGAACGAGTTCCCCCAAAAACCACCTAACCATCCATAGTACTGGACAGTTTTTAAAAAGCGT
TTGATGTCGCTCCTAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Addiction Module Antitoxin; StbE/RelE-Family Protein; Addiction Module xin Rele/Stbe Family; Plasmid Stabilization System Protein/Addiction Module xin; Addiction Module xin RelE/StbE Family Protein

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF

Sequences:

>Translated_47_residues
MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF
>Mature_47_residues
MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5406; Mature: 5406

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA