| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229587239
Identifier: 229587239
GI number: 229587239
Start: 1256503
End: 1257150
Strand: Direct
Name: 229587239
Synonym: RAF_ORF1229
Alternate gene names: NA
Gene position: 1256503-1257150 (Clockwise)
Preceding gene: 229587234
Following gene: 229587240
Centisome position: 98.28
GC content: 28.24
Gene sequence:
>648_bases ATGTTTGAAGTTTTTTATAATTTTTGCGGCTTAAATCAAGAAATATTCTTATTTTTGAATAAAATTACTAATATCGGCTT TATACCTTATTTTTTTAAAATAATTTCGTTTTGTTTTAATATCGCTAATTTCGCTTTAATATATATTTTATACTGTATAT ATTTTTATATTCAATTAAAGAAAACCAAAAATGATAAGAAGCGGCAAAATAAATTCTGGCACAATTATAATAAGTTAGTT GAAATCGGTATAATATACGGGGTATTCGGTTTAATTTTTACCGCTCTTAAATTTTCAGTTAATTTCCCTCGCCCTTATTG CAGTCTTCCTGTAGATAGTTTCATGACCATAATAAATACTGCAAACGAAAGATGCTTTTCAAGCTTTCCAAGCAGCCACG CAGCTCTTAGCGTGTTAGTAACGTATTTTGCTTGGAATTATATAAAATTACCATTAAAAATCTTAATGATTTGTGTTATT ATGCTCGTGTCTTTATCTCGCATAAGCCTTGCTATGCATTACCCAAGTGATATAATCTACGGCATTATTATTACATTTAT AACAATACTGATAGGTAAGTTAATTTATCGCATCTTTGCAAATCATATAATAAGAAAGATCGGGGATTTTCTATTAATGA GGCAGTAA
Upstream 100 bases:
>100_bases GAAGGAGATGTGCAAGTACTACAATCGCACCCGATCACCGGTACGCCTATAGATGCTCCACACCCAAGTATTGTTACTTG TAACATAAATATTTAAAATA
Downstream 100 bases:
>100_bases TTAAGAAAAAACATATAAAAAACTTGTTTTTTAATCTTGAAAGTTTTTAATATGCACGCTACAATGTAGCTACATTATTG AAAGAAGATTTTTATGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ
Sequences:
>Translated_215_residues MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ >Mature_215_residues MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25310; Mature: 25310
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLK CHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTKNDKKRQNKFWHNYNKLVEIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVIMLVSLSRISLAMHYPSDIIY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLK CHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTKNDKKRQNKFWHNYNKLVEIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVIMLVSLSRISLAMHYPSDIIY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA