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The map label for this gene is lolA

Identifier: 229587232

GI number: 229587232

Start: 1249069

End: 1249707

Strand: Direct

Name: lolA

Synonym: RAF_ORF1222

Alternate gene names: NA

Gene position: 1249069-1249707 (Clockwise)

Preceding gene: 229587229

Following gene: 229587233

Centisome position: 97.69

GC content: 25.98

Gene sequence:

>639_bases
ATGAAAAAAATATTTTTTCTAATCATTATTTATCTTTTTGTGAATTCAAGCTTAACATTTGGGGCAGATGATAAAACAGC
TATTTCGGAACTAAAAACTTATCTACGTAAGATAAAATCGGTTGCGATAGATTTTACTCAAGAAGATTCGTACGGTAAAA
TAGTTAAAGGAAAATTACTGATCCATAAACCTTATAATTTTAGATGTAATTATTATCCTCCTTTCCCTTTAGTTATAATA
GGTACTAAAAATTTCGTATCGATGTATGATTATGATATGGAGCAAGTAAGCCGTATTAATAGAAGCGAAAATACATTTAA
TTTTTTATTAGAAGATAATGAGCATTTTGACAAGGATTTTGTTTTTGAAGCGGTAATTAACGCAAGAAATATTTCTAAAA
TTACTATCTATCATACTCTAACGGAAAAACGTAGCGAAATTACTTTTAATAAAGCTACTCAACAAATTGAAGCATTAAAA
ATATTTGAAGATAATAATATAGTCACTATTACTTTTGATAAAATAGCTAAAGTACAAAAATTTTCCGATGATTTGTTTAA
AATAAAAAACCCTGAAATATTCGGTCCTCCTAAAAGATTAACAAAATCGGAAATAGAAAAAAAATATATTGTTTCTTGA

Upstream 100 bases:

>100_bases
TTTCTTTTAAAGCAACGATTTTCATAAATACTAATTATATTTTGCATTAACTGAATACATAAGGTATTTTAAACATAATT
TAAAATATAAAACAACGAAA

Downstream 100 bases:

>100_bases
AAATAAACAGGTTATGTTAATTATGCTAGTAGTGGGCATTGTACCTGTTTAGTCGGTCAGGTCTGAAAGGAAGCAGCCAG
AGTGGGATTCGATGGGTCAT

Product: Outer membrane lipoprotein-sorting protein LolA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKIFFLIIIYLFVNSSLTFGADDKTAISELKTYLRKIKSVAIDFTQEDSYGKIVKGKLLIHKPYNFRCNYYPPFPLVII
GTKNFVSMYDYDMEQVSRINRSENTFNFLLEDNEHFDKDFVFEAVINARNISKITIYHTLTEKRSEITFNKATQQIEALK
IFEDNNIVTITFDKIAKVQKFSDDLFKIKNPEIFGPPKRLTKSEIEKKYIVS

Sequences:

>Translated_212_residues
MKKIFFLIIIYLFVNSSLTFGADDKTAISELKTYLRKIKSVAIDFTQEDSYGKIVKGKLLIHKPYNFRCNYYPPFPLVII
GTKNFVSMYDYDMEQVSRINRSENTFNFLLEDNEHFDKDFVFEAVINARNISKITIYHTLTEKRSEITFNKATQQIEALK
IFEDNNIVTITFDKIAKVQKFSDDLFKIKNPEIFGPPKRLTKSEIEKKYIVS
>Mature_212_residues
MKKIFFLIIIYLFVNSSLTFGADDKTAISELKTYLRKIKSVAIDFTQEDSYGKIVKGKLLIHKPYNFRCNYYPPFPLVII
GTKNFVSMYDYDMEQVSRINRSENTFNFLLEDNEHFDKDFVFEAVINARNISKITIYHTLTEKRSEITFNKATQQIEALK
IFEDNNIVTITFDKIAKVQKFSDDLFKIKNPEIFGPPKRLTKSEIEKKYIVS

Specific function: Unknown

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFFLIIIYLFVNSSLTFGADDKTAISELKTYLRKIKSVAIDFTQEDSYGKIVKGKLL
CHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEE
IHKPYNFRCNYYPPFPLVIIGTKNFVSMYDYDMEQVSRINRSENTFNFLLEDNEHFDKDF
EECCCCCEECCCCCCCEEEEECCCEEHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCHHH
VFEAVINARNISKITIYHTLTEKRSEITFNKATQQIEALKIFEDNNIVTITFDKIAKVQK
HHHHHHCCCCCEEEEEEEEECCCCHHCCHHHHHHHHHEEEEEECCCEEEEEHHHHHHHHH
FSDDLFKIKNPEIFGPPKRLTKSEIEKKYIVS
HCCHHEEECCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIFFLIIIYLFVNSSLTFGADDKTAISELKTYLRKIKSVAIDFTQEDSYGKIVKGKLL
CHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEE
IHKPYNFRCNYYPPFPLVIIGTKNFVSMYDYDMEQVSRINRSENTFNFLLEDNEHFDKDF
EECCCCCEECCCCCCCEEEEECCCEEHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCHHH
VFEAVINARNISKITIYHTLTEKRSEITFNKATQQIEALKIFEDNNIVTITFDKIAKVQK
HHHHHHCCCCCEEEEEEEEECCCCHHCCHHHHHHHHHEEEEEECCCEEEEEHHHHHHHHH
FSDDLFKIKNPEIFGPPKRLTKSEIEKKYIVS
HCCHHEEECCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]