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The map label for this gene is 229586973

Identifier: 229586973

GI number: 229586973

Start: 917307

End: 917843

Strand: Direct

Name: 229586973

Synonym: RAF_ORF0870

Alternate gene names: NA

Gene position: 917307-917843 (Clockwise)

Preceding gene: 229586972

Following gene: 229586978

Centisome position: 71.75

GC content: 30.73

Gene sequence:

>537_bases
ATGAAAGATTGTATAAAAAAAATTGCTTTTATTTTTAGTGGATTATTCATAATAACCGGCACTTTTGTTTTGTATAGCAT
AGAAAACATCAACGCATCAACAGCACCAAAAAAGTACGGAGCTTGGACTTTAAATTGTACTCTTAATAATGAGAAAAAAC
AACTTTGCTTCTTATCACAACAAATTAATAATCTAGAGAAAGATAAAGAAAAGGAAATATTAGCCATTTATCACATAGGT
TATTTCAATGGGGAACAAGAAAAACAGGAATTAAAAATAATAGAAATAGTCCCGTCAAATGTTCAAATTCCGACAGGTAC
AGTTATTAATAGCGGTGACAAACGAATAGCAGCCGGAAAATATGTAAATTGTACAGTAAACGGCTGTCAGGCTTTAGCTA
TTATTACAAAAGACGATCTAGACATGATTTTATCAAACGATAATTATATAGAACTAATTACCGCAGACGGCAAACAAGTT
AAAATTTCATTTATAAAAGACGGCTTAAAGGAAGGCCTAAAAGCTTTAAGTAGATAG

Upstream 100 bases:

>100_bases
CGGTAAGAGCTTTAATAACAGGTATGACTGCATCACCTAGCGTATTTGAGATTGCAGAAATTTTAGGAAAAGAAAATATT
TTAAAAAGGTTAAAAATTAT

Downstream 100 bases:

>100_bases
TAACGCAACAATGCTTAAATTCTTACGTTACTATCTACTTAAAGCTTTTAGAACCCAATTTTTTAAGTTTTATATATAAA
ATTTAAATTATCTTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKDCIKKIAFIFSGLFIITGTFVLYSIENINASTAPKKYGAWTLNCTLNNEKKQLCFLSQQINNLEKDKEKEILAIYHIG
YFNGEQEKQELKIIEIVPSNVQIPTGTVINSGDKRIAAGKYVNCTVNGCQALAIITKDDLDMILSNDNYIELITADGKQV
KISFIKDGLKEGLKALSR

Sequences:

>Translated_178_residues
MKDCIKKIAFIFSGLFIITGTFVLYSIENINASTAPKKYGAWTLNCTLNNEKKQLCFLSQQINNLEKDKEKEILAIYHIG
YFNGEQEKQELKIIEIVPSNVQIPTGTVINSGDKRIAAGKYVNCTVNGCQALAIITKDDLDMILSNDNYIELITADGKQV
KISFIKDGLKEGLKALSR
>Mature_178_residues
MKDCIKKIAFIFSGLFIITGTFVLYSIENINASTAPKKYGAWTLNCTLNNEKKQLCFLSQQINNLEKDKEKEILAIYHIG
YFNGEQEKQELKIIEIVPSNVQIPTGTVINSGDKRIAAGKYVNCTVNGCQALAIITKDDLDMILSNDNYIELITADGKQV
KISFIKDGLKEGLKALSR

Specific function: Unknown

COG id: COG5342

COG function: function code R; Invasion protein B, involved in pathogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19856; Mature: 19856

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDCIKKIAFIFSGLFIITGTFVLYSIENINASTAPKKYGAWTLNCTLNNEKKQLCFLSQ
CHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
QINNLEKDKEKEILAIYHIGYFNGEQEKQELKIIEIVPSNVQIPTGTVINSGDKRIAAGK
HHHHHCCCCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCEECCCCCEEECCCCEEECCC
YVNCTVNGCQALAIITKDDLDMILSNDNYIELITADGKQVKISFIKDGLKEGLKALSR
EEEEEECCCEEEEEEEECCEEEEECCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDCIKKIAFIFSGLFIITGTFVLYSIENINASTAPKKYGAWTLNCTLNNEKKQLCFLSQ
CHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
QINNLEKDKEKEILAIYHIGYFNGEQEKQELKIIEIVPSNVQIPTGTVINSGDKRIAAGK
HHHHHCCCCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCEECCCCCEEECCCCEEECCC
YVNCTVNGCQALAIITKDDLDMILSNDNYIELITADGKQVKISFIKDGLKEGLKALSR
EEEEEECCCEEEEEEEECCEEEEECCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA