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The map label for this gene is parB [H]

Identifier: 229586299

GI number: 229586299

Start: 80240

End: 81100

Strand: Direct

Name: parB [H]

Synonym: RAF_ORF0082

Alternate gene names: 229586299

Gene position: 80240-81100 (Clockwise)

Preceding gene: 229586298

Following gene: 229586300

Centisome position: 6.28

GC content: 27.64

Gene sequence:

>861_bases
ATGGCGAAAAATAAAGGACTAGGAAGAGGATTATCTTCATTACTTGGAGAAGAAGTTATTTCTATAGAATCAGAAATAGT
ACAAATAATAAATATTGATAAAATAAGACCAAACGAGAATCAGCCTAGAAAAAACTTTGAATATGATAAAATAAAAGAAT
TAGCAGATTCTATATTGAATAATGGTTTATTACAGCCTATTATTGTTGATAATAATTTCCAAATTATAGCAGGAGAGCGA
CGCTGGCGTGCATGTAAATTAGCAAAAGTTTTAGAGATACCGGTAATTATAAAAAATTTAGATCCTAGAGAGAGTATGGA
AATAGCATTAATTGAGAACATACAAAGAACTGATTTAACAGTGATGGAAGAAGCTCGTGGCTTTAAATATTTAATAGAAA
ATTTTAATTATACGGCAGAAAAATTAGCTGAAAGGCTTGGTAAAAGTCGTAGTCATATAGCTAATTTATTAAGGCTTAAT
AATTTGCCGCAGTCTATTCAAGATAAAGTAAATGAAAATATACTAAGTATGGGTCAAGCTCGGTGTTTAATAAATCATGA
ACATGCAGAAGTAATAGCCGATTATATTATAAATAATGATTTAAATGTACGTCAAACAGAAGAACTAGTAAGGCAATGGT
ATAAAAATGAGTATACAAAATCCCCAAACAATAATAACAAAATAGGAAAGCGTTTTTTAAAGGACAACGCTACGGATAAT
GATCTAGAATTATTAGTAAAAGCTTTATCAGAAAAATTTGGTATAAAAATAACAATAGAAAATTATCCATTAGGTGGAAA
ATTAATATTTCATTATAAAGATTTGGAAGAATTAGACTTGATATTGTTAAAATTAAATTAA

Upstream 100 bases:

>100_bases
TCTGAAGCTCCTTCATATGGAAAACCGGCTATTATATATGATTATAAATGTTCGGGAGCAGTTGCATATATAGAACTTAC
AAAAGAAATCTTAGAAAGAT

Downstream 100 bases:

>100_bases
AATGCATATGGAAAAATTATCAATAAGCTTGAACGAAAAATTATAAGTATAAAAGTATACACAATCCTCAAGCTGCTAAA
ATTAAAGTATATATACAGCA

Product: ParB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MAKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDKIKELADSILNNGLLQPIIVDNNFQIIAGER
RWRACKLAKVLEIPVIIKNLDPRESMEIALIENIQRTDLTVMEEARGFKYLIENFNYTAEKLAERLGKSRSHIANLLRLN
NLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDN
DLELLVKALSEKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN

Sequences:

>Translated_286_residues
MAKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDKIKELADSILNNGLLQPIIVDNNFQIIAGER
RWRACKLAKVLEIPVIIKNLDPRESMEIALIENIQRTDLTVMEEARGFKYLIENFNYTAEKLAERLGKSRSHIANLLRLN
NLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDN
DLELLVKALSEKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN
>Mature_285_residues
AKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDKIKELADSILNNGLLQPIIVDNNFQIIAGERR
WRACKLAKVLEIPVIIKNLDPRESMEIALIENIQRTDLTVMEEARGFKYLIENFNYTAEKLAERLGKSRSHIANLLRLNN
LPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDND
LELLVKALSEKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32975; Mature: 32844

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDKIKELADSILN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NGLLQPIIVDNNFQIIAGERRWRACKLAKVLEIPVIIKNLDPRESMEIALIENIQRTDLT
CCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCHHHHH
VMEEARGFKYLIENFNYTAEKLAERLGKSRSHIANLLRLNNLPQSIQDKVNENILSMGQA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RCLINHEHAEVIADYIINNDLNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDN
HHEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH
DLELLVKALSEKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN
HHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
AKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDKIKELADSILN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NGLLQPIIVDNNFQIIAGERRWRACKLAKVLEIPVIIKNLDPRESMEIALIENIQRTDLT
CCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCHHHHH
VMEEARGFKYLIENFNYTAEKLAERLGKSRSHIANLLRLNNLPQSIQDKVNENILSMGQA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RCLINHEHAEVIADYIINNDLNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDN
HHEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH
DLELLVKALSEKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN
HHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]